PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027063441.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 337aa MW: 37492 Da PI: 7.0827 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 107.4 | 7.3e-34 | 197 | 254 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCts++C vkk+vers +dp++v++tYeg+Hnh+ XP_027063441.1 197 EDGYRWRKYGQKAVKNSPFPRSYYRCTSQKCIVKKRVERSFQDPSIVITTYEGQHNHH 254 8********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 337 aa Download sequence |
MSDHHRNDGY HYGTNSFYHD YMGTGGSTST FPFFGGGNSL MYNQPSTSQN LAGSSSAYDP 60 TSYMSFTDCL QGTAADYNNL SGAFDMSCNS LPDQSVCPVD NSSADKNTTS LGEAAAGAAT 120 TSAENPRTPV SSLSCSSNET GVEEESSKSN TTDLQTKGSE DRDDKSKKLN KPKKKGEKKP 180 REPRFAFLTK SDIDHLEDGY RWRKYGQKAV KNSPFPRSYY RCTSQKCIVK KRVERSFQDP 240 SIVITTYEGQ HNHHCPATLR GNAAAMLSPS FLSSNSASLP TFPPEFITHM LPSTSRNYQN 300 PPYYQNFNPQ DQQFQLPHDY TNFFQDMNPS FMHKPEP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29860.1 | 3e-51 | WRKY family protein |