PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027063234.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | C2H2 | ||||||||
Protein Properties | Length: 174aa MW: 19241.3 Da PI: 10.7674 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.7 | 0.00039 | 51 | 73 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k F++ L H +H XP_027063234.1 51 FECKTCNKKFPTFQALGGHRASH 73 89**********99999998887 PP | |||||||
2 | zf-C2H2 | 12.3 | 0.00051 | 96 | 118 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp Cg F+ L H+r+H XP_027063234.1 96 HECPFCGLEFPLGQALGGHMRRH 118 79********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MTVKRSREEA PAAETVEETA AINLLMLLSR VGEATTSAAA DQAATPSGRV FECKTCNKKF 60 PTFQALGGHR ASHKKLKLMA ELLTQPSNSP RKPKKHECPF CGLEFPLGQA LGGHMRRHRA 120 AMLEGRREID ESHGRKVAVP VLKRSNSSKR VFGLDLNLSP FENDLRQLMK APLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37430.1 | 1e-35 | C2H2 family protein |