PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027063205.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 366aa MW: 41731 Da PI: 7.2464

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027063205.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.4	2.7e-53	11	140	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeel+++yL+kkv+ + ++l +v++evd++k+ePwdL++ ++ + ++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk++ XP_027063205.1 11 VPPGFRFHPTDEELLHYYLRKKVSYEAIDL-DVVREVDLNKLEPWDLKEkcRIGSgPQNEWYFFSHKDKKYPTGTRTNRATSAGFWKATGRDKAI 104 69**************************.99**********952444443456******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++ +g++ktLvfy grap+g+ktdW+mheyrl XP_027063205.1 105 HLGNSKRIGMRKTLVFYIGRAPHGQKTDWIMHEYRL 140 ********************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MMPAATGQFS VPPGFRFHPT DEELLHYYLR KKVSYEAIDL DVVREVDLNK LEPWDLKEKC 60 RIGSGPQNEW YFFSHKDKKY PTGTRTNRAT SAGFWKATGR DKAIHLGNSK RIGMRKTLVF 120 YIGRAPHGQK TDWIMHEYRL DDENAEIQED GWVVCRVFKK KSNTNRGFQP DHELDLRDHE 180 EHEHLTPHMK LAGVSTSSMM EPTTRQNSQP LCDYSLVDCS MHLPQLLSPD VAESMSTVVR 240 HHYHHPHHHP PSFLPVPSLN AVVEDLDCNS QNLLSLTSGS GGCGGGLLQY NEEKFSSDWT 300 FLDKLLASHQ SFDQQSKCYS FMSQPATAAH HHHHHVVPSS AQKLPLPIIP FHHVGSGPEF 360 VKFSHK

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MMPAATGQFS VPPGFRFHPT DEELLHYYLR KKVSYEAIDL DVVREVDLNK LEPWDLKEKC  60
RIGSGPQNEW YFFSHKDKKY PTGTRTNRAT SAGFWKATGR DKAIHLGNSK RIGMRKTLVF  120
YIGRAPHGQK TDWIMHEYRL DDENAEIQED GWVVCRVFKK KSNTNRGFQP DHELDLRDHE  180
EHEHLTPHMK LAGVSTSSMM EPTTRQNSQP LCDYSLVDCS MHLPQLLSPD VAESMSTVVR  240
HHYHHPHHHP PSFLPVPSLN AVVEDLDCNS QNLLSLTSGS GGCGGGLLQY NEEKFSSDWT  300
FLDKLLASHQ SFDQQSKCYS FMSQPATAAH HHHHHVVPSS AQKLPLPIIP FHHVGSGPEF  360
VKFSHK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79580.1	1e-108	NAC family protein