PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027062707.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 212aa MW: 23938.3 Da PI: 10.3702

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027062707.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.2	1.4e-31	18	71	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLHe+Fveave+LGG++kAtPk+i ++m+v gL ++hvkSHLQ+YR+ XP_027062707.1 18 PRLRWTPELHEHFVEAVEHLGGKQKATPKRIIQMMGVRGLQMSHVKSHLQMYRS 71 8****************************************************6 PP
2	Myb_DNA-binding	52.4	1.2e-16	19	70	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av+ lGg+ t+k+I ++mg g+ ++ks++q+y+ XP_027062707.1 19 RLRWTPELHEHFVEAVEHLGGKqkaTPKRIIQMMGvRGLQMSHVKSHLQMYR 70 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
METCIKTGIR KYKKSSFPRL RWTPELHEHF VEAVEHLGGK QKATPKRIIQ MMGVRGLQMS 60 HVKSHLQMYR SLKKRTTINL VVPAKLHEEQ KPDAVVRSPP SKVGIHQEPP TKRKESWSSI 120 TCKSKTKTIS HGDSQVIQGY TNCNTSRENQ NGVCNSLQAI AECGKGRSWW SSNDRLVSQS 180 SASSNSFNLL LHQSSKDNHV NLDLSISSCY HC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-25	G2-like family protein