PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027062649.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 240aa MW: 26900.2 Da PI: 7.5066 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.1 | 4.1e-10 | 61 | 96 | 3 | 38 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-S CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKl 38 r+h+e+ErrRR+riN + Lr+l+P sk+ kK XP_027062649.1 61 RNHSEAERRRRERINGHLTSLRSLIPGTSKELRKKA 96 58************************9764444443 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MEFFNSFNGF PENYGYQGTV KNGSGSSSSL ILDNEKGELV RALLRPGQKG VNAEKALVAL 60 RNHSEAERRR RERINGHLTS LRSLIPGTSK ELRKKATEAT KGMLVPTDTD EVRVEEHQAD 120 AAGEPSYTIR AFLCCDYKHE LFSDLRQALE TLPLKTVSAE IATLGSRMVN VFEMTGCDQQ 180 NLENSEGREL LVNSVRQALR SVLDKFYASE EFLSRNALSN KRRRVSLFDA SSSSSLENFW |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 67 | 72 | ERRRRE |
2 | 221 | 225 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68810.1 | 4e-24 | bHLH family protein |