PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027062546.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 650aa    MW: 70659.2 Da    PI: 7.0441
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027062546.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.91.4e-30375433259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  XP_027062546.1 375 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGNHNHP 433
                     7***************************99****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 650 aa     Download sequence    
MAKGSGLSFD PDRIGLFLHK PTVINSLLHH QEDKKGKHHN NYRHLLYYHH HHKLKQEEAP  60
AAFMEMDSAS AVVNKSNNNS RSSPPTTIQF PVNLNCSTHD DDQDDGPLPH NNSDHHQEMD  120
FFADKKLKTD ESKAATIPHP DANTKDLSGP TDLGFNVNTG LHLLTANTSS DQSIVDDGIS  180
PHSDDKRTKS ELAVLQAELE RLNGENLRLR EVLTQVSNNY NNLQMHLMTV MQQQPQQKQD  240
HIKADNIGEG QEGKLPLEDN NNKHQQNSHG LMVPRQFMDL GLAAGATVET DEASLSSSEG  300
RSGRERSRSP TNNVEASTGG SDGRDDSPEK GSQGWGPNKV PRLNNGSKNV DQATEATMRK  360
ARVSVRARSE APMITDGCQW RKYGQKMAKG NPCPRAYYRC TMAAGCPVRK QVQRCAEDRT  420
ILITTYEGNH NHPLPPAAMA MASTTSSAAR MLLSGSMPSA DGLMNSNFLA RTLLPCSSSM  480
ATISASAPFP TVTLDLTQNP NPLQFQRSPN QFHLPFPNAP QNFVGNPVAL LPQIFGQALY  540
NQSKFSGLQM SQDSDAAHLG HQVPQLPPLH QGQQNPLADT VTALTADPNF TAALAAAITT  600
IIGNPQSTHA ANNSSLNITT NTSNNNGSVT TSNNNSNGNN KVLNTSFPGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-117WRKY family protein