PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027062465.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family BES1
Protein Properties Length: 319aa    MW: 34215.1 Da    PI: 8.5708
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027062465.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822208.71.6e-6421441149
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     ++++r ptwkErEnnkrRERrRRaiaa i+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg++p ++++++g s+sasp+ss++
  XP_027062465.1   2 TSGTRLPTWKERENNKRRERRRRAIAANIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCRPVDRMDIMGGSTSASPCSSYH 96 
                     5899******************************************************************************************* PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsss 149
                             +sp +sy++sp+sssfpsp+s+  + + +   +sl+p+l++ls++sss
  XP_027062465.1  97 --------PSPGTSYNPSPASSSFPSPASSPYAANINGdgNSLIPWLKNLSSSSSS 144
                     ........*******************9987665544456**********997776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MTSGTRLPTW KERENNKRRE RRRRAIAANI FAGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WTVEPDGTTY RKGCRPVDRM DIMGGSTSAS PCSSYHPSPG TSYNPSPASS SFPSPASSPY  120
AANINGDGNS LIPWLKNLSS SSSSTSSTKF QLLCHGGSIS APVTPPLSSP TARTPRLKTD  180
WDDSSARASW GSHSSFLPLS TPPSPGRQAP PDSEWFAGMQ IPQGGPTSPT FSLVSANPFA  240
FKFESLRHTG SHMCTPGQSG TCSPAIPAGS DVPMAEVISD EFAFRSIKGG LVKPWEGERI  300
HEDCGSDDLE LTLGSSKTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-108BES1 family protein