PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027062380.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 314aa MW: 35732.6 Da PI: 8.1853

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027062380.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.7	5.5e-50	11	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhP+deel+++yL k+v+ + + + evd++k+ePwd+p+++ + ke+yf+s+rd+kyatg r+nrat sgyWkatgkd++vl+ XP_027062380.1 11 LPPGFRFHPRDEELICDYLMKRVACCDQPP--LMIEVDLNKCEPWDIPENACVGGKEYYFYSQRDRKYATGLRTNRATLSGYWKATGKDRPVLR- 102 79*******************9988666..6899********7777789**********************************9. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 kg+lvg++ktLvfy+grapkg+ktdWvmhe+rle XP_027062380.1 103 KGTLVGMRKTLVFYQGRAPKGRKTDWVMHEFRLE 136 999**************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MMNLSMVEAK LPPGFRFHPR DEELICDYLM KRVACCDQPP LMIEVDLNKC EPWDIPENAC 60 VGGKEYYFYS QRDRKYATGL RTNRATLSGY WKATGKDRPV LRKGTLVGMR KTLVFYQGRA 120 PKGRKTDWVM HEFRLEGPFG PPKLSSLKED WVLCRVFFKN RDNNIIAAKQ GMDMNSYDGE 180 TSPSPLPPLM DPYFKFGQTQ TNTNEHEQVP CFSIFSPDQA NNNSQPFSYL AHMDVPSFST 240 KNMPTFNFGG IPDFGAYFSS SCREQKVIKA VLNQLTRMEN ASPNVKGSPS FGEASTSDSF 300 LSEVALSTMW NNQY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56010.2	1e-113	NAC family protein