PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027062251.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 496aa MW: 54509.5 Da PI: 7.449 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 92.5 | 3.1e-29 | 280 | 338 | 1 | 60 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 ldDgynWrKYGqK vkg+ f rsYY+Ct+++C++kk+ver + d+++++i+Y g+H+h+k XP_027062251.1 280 LDDGYNWRKYGQKLVKGNVFVRSYYKCTYSTCRAKKQVERLH-DGRLTDIKYIGKHEHPK 338 59****************************************.***************85 PP | |||||||
2 | WRKY | 35.4 | 2.1e-11 | 457 | 478 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ++Dgy+WrKYGqK vkg+++pr XP_027062251.1 457 VNDGYRWRKYGQKLVKGNPNPR 478 58*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 496 aa Download sequence |
MQPRDSPHNG VPVSPSNSGE FVSCVVPKIE SGSLQQKQIS ASESCEPEAH KVPPLVKNEK 60 DELNQWQSHG AGNHSTAYGE TEVLDSGKDV AISNRVSIVP KKELVSDGQL HASVSSKQLI 120 PENGNRASQF NQVSVQPKEE LGPSEQNLSP HTGSNTPMSG EKLIPESGTH VSQFNHVSII 180 TKMDPDGPEQ EQGTDAGKDA SLPCEGRGTD SSVLEKSLQH MQNTNMRVCT SSSDQEKITY 240 SAKPEKVLYK LQPRRNPDSG VHATQSEQGS NSPRIREKAL DDGYNWRKYG QKLVKGNVFV 300 RSYYKCTYST CRAKKQVERL HDGRLTDIKY IGKHEHPKLQ SSPQCTAFVS PSEVSKADMP 360 AIATSEAEDE LVVAHNDKPQ PIDPAETPRE LAATASNNST GKAVPQLHNP RDDIDNDISP 420 TSKRQKRETC DVHNNQVKKT HCESRQVVHM MSEVDIVNDG YRWRKYGQKL VKGNPNPRDL 480 VLSRGMSNLG GSSKGT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G04880.1 | 2e-45 | WRKY family protein |