PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027061314.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 523aa MW: 57745 Da PI: 6.9454 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 50.9 | 2.7e-16 | 346 | 392 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+ellPk+ K +Ka++L +A+eY+ksLq XP_027061314.1 346 VHNLSERRRRDRINEKMRALQELLPKS-----NKTDKASMLDEAIEYMKSLQ 392 6*************************7.....5******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 523 aa Download sequence |
MNPCFPDWNF GAEFPEPILK NKPLGMDNEL VELLWENGQI VLHPQSHHHH HPKPGTADQQ 60 ENQSRQINKH NHDQSMSRGS TGGGSCQNQV TSLIQDTETV SWIDDPFDKE FTSDFLSEFP 120 ISNPVEQGPH EDDKFKKFGI SQDLHNHPVQ LPNDKPSDVI NSLPPRFHNF DSAQPNHSHL 180 PRAANAPLSA MADLRSSSDG VSNRTLGGEV REYSSAKTVG TSHCGSNLVV NDTDTSRVSS 240 GGIADHRGFS GAMAKDHRVG KMSSQSDRLQ TDQTEETAIT SSSSDGSETS FGRTCNQSTG 300 TNSHKRKSRD AEDSECQSKA AELESAARKK PAVKSGSSRK SRAAEVHNLS ERRRRDRINE 360 KMRALQELLP KSNKTDKASM LDEAIEYMKS LQLQLQMMWM GSGMAPMMFP GVQHYMPRLG 420 MGIGPLAMPS IHSQMHLPRL PLLDQATIPN QAALCHQTTM FNPMNYHTQL QNSKLSEQYA 480 NYMAFHPLQN ASQLNVFGFG PNTAQQHNHS LAPSGNSNGP SVG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 351 | 356 | ERRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20180.2 | 2e-41 | bHLH family protein |