PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027061276.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 824aa MW: 94470.1 Da PI: 7.7879

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027061276.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	88.5	9.4e-28	62	149	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+eYAk++GF++++++s++sk+++e+++++f Cs++g + e++ ++r+ ++++t+Cka+++vk++kdgkw+++++ +eHnHel p XP_027061276.1 62 SFYQEYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGITPESDGG---SSRRPSVKKTDCKASMHVKRKKDGKWYIHEFLKEHNHELLP 149 5**************************************999888...7788889*****************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 824 aa Download sequence
MVDSSENAIQ VTAHMVDVAD QASHRDVGIA HSTAKDITGF GGVTEFEPHD GIEFESHEAA 60 YSFYQEYAKS MGFTTSIKNS RRSKKSKEFI DAKFACSRYG ITPESDGGSS RRPSVKKTDC 120 KASMHVKRKK DGKWYIHEFL KEHNHELLPA LAYHFRIHRN VKLAEKNNID ILHAVSERTR 180 KMYVQMSRQS GGSPEIGFLR SSSDSQLDRG RSLVVEEGDS QLMVEYFMHL QRENPYFFYA 240 IDVNEDQRLR NLFWVDAKSR KDYRSFNDVI VFDTSYMKGN EKMPFAPFVG VNHHFQPMLL 300 GCGLLADETV STFLWLMKTW HKAMGGQAPK VIITDQDKAL KVAVEEVFPN SRHCFALWHI 360 MERLPDTLSH TIKQHESFTR KFSKCVFKSL TDEQFDMKWW KMVGRFELHE NEWIHSLYED 420 RKKWVPAFLR DAFLAGMSTI QRSESLISFF DKCIHKKISL KEFIRQYGTI LQNRFEEEAI 480 ADFDTWHKQP ALKSPSPWEK QMSTIYTHAI FKKFQVEVLG VVGCHPKKES ENGSDVTFRV 540 DDCEKGEDFT VMWNEATSEV SCSCLMFEFK GFLCRHAMIV LQMCGLSSIP FRYILKRWTK 600 DVKNRQTVVD GTERILTRVQ RYNDLCRRAI ELGEEGSLSE ESYNIAFHAL VEGLKNCVDV 660 NNKTGTEYSS NPIVLRGAQE EKHGVLSTKE SKKKISNKKR KVQSESEVAT LQVEGSLQPM 720 ENLSSNAMTI NGYYGSQQNV QGLLQIQLNL MEPPHDAYYV NQQNMQGLGQ LNSIAPSQDG 780 FFGTQQNMHG LGNLDFRPPS FTYGLQDDSR VRSGQLPGGS AKHA

Sequence ? help Back to Top

Protein Sequence Length: 824 aa Download sequence

MVDSSENAIQ VTAHMVDVAD QASHRDVGIA HSTAKDITGF GGVTEFEPHD GIEFESHEAA  60
YSFYQEYAKS MGFTTSIKNS RRSKKSKEFI DAKFACSRYG ITPESDGGSS RRPSVKKTDC  120
KASMHVKRKK DGKWYIHEFL KEHNHELLPA LAYHFRIHRN VKLAEKNNID ILHAVSERTR  180
KMYVQMSRQS GGSPEIGFLR SSSDSQLDRG RSLVVEEGDS QLMVEYFMHL QRENPYFFYA  240
IDVNEDQRLR NLFWVDAKSR KDYRSFNDVI VFDTSYMKGN EKMPFAPFVG VNHHFQPMLL  300
GCGLLADETV STFLWLMKTW HKAMGGQAPK VIITDQDKAL KVAVEEVFPN SRHCFALWHI  360
MERLPDTLSH TIKQHESFTR KFSKCVFKSL TDEQFDMKWW KMVGRFELHE NEWIHSLYED  420
RKKWVPAFLR DAFLAGMSTI QRSESLISFF DKCIHKKISL KEFIRQYGTI LQNRFEEEAI  480
ADFDTWHKQP ALKSPSPWEK QMSTIYTHAI FKKFQVEVLG VVGCHPKKES ENGSDVTFRV  540
DDCEKGEDFT VMWNEATSEV SCSCLMFEFK GFLCRHAMIV LQMCGLSSIP FRYILKRWTK  600
DVKNRQTVVD GTERILTRVQ RYNDLCRRAI ELGEEGSLSE ESYNIAFHAL VEGLKNCVDV  660
NNKTGTEYSS NPIVLRGAQE EKHGVLSTKE SKKKISNKKR KVQSESEVAT LQVEGSLQPM  720
ENLSSNAMTI NGYYGSQQNV QGLLQIQLNL MEPPHDAYYV NQQNMQGLGQ LNSIAPSQDG  780
FFGTQQNMHG LGNLDFRPPS FTYGLQDDSR VRSGQLPGGS AKHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein