PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.50_1s0060.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family CPP
Protein Properties Length: 348aa    MW: 37821.7 Da    PI: 9.8922
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.50_1s0060.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR41.82.1e-134378439
                  TCR  4 kgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39
                         +gC+C+k kClk YC Cf++gk C+ eC+C +C+ +
  Bobra.50_1s0060.1.p 43 QGCHCTKNKCLKAYCVCFKSGKLCGPECQCRGCFSD 78
                         79*******************************976 PP
2TCR37.93.4e-12105141238
                  TCR   2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkN 38 
                          ++++CnCk+s+C k YC C+aag+ C+ +CkC++C+N
  Bobra.50_1s0060.1.p 105 KSQSCNCKNSRCTKAYCVCYAAGRRCTTSCKCHGCNN 141
                          6799********************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MNQFPSKLGP QGMLISPTVK LVGLEGSNFT GPWVNGFGGF KPQGCHCTKN KCLKAYCVCF  60
KSGKLCGPEC QCRGCFSDGT HATDWEIARA KFHLKNPAIL DSEGKSQSCN CKNSRCTKAY  120
CVCYAAGRRC TTSCKCHGCN NLCTTVLGKV IADNLVGTPS DVLTAPVLTA AQKEPRLKLA  180
SIRPTYDLFV GDESIAKTAS GCTLPWDLLS LGLAAYPSIP YMVQHTLGCT YGVSMPQPVF  240
LQGIGPPIIQ GATGDLPPVV SRGETAAESQ EQWHELAQVS VSKKPIAQAL SSPRKPSFRS  300
RRRMGPTKRR DTASKKRMSS QRQRQPQSPL QQYTRRKQRG PRRSPFE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22780.14e-17CPP family protein