PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bobra.50_1s0059.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
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Family | CPP | ||||||||
Protein Properties | Length: 380aa MW: 41783.9 Da PI: 8.7393 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 45.6 | 1.4e-14 | 149 | 189 | 3 | 42 |
TCR 3 kkgCnCkkskClkkYCeCfaagkkCsee.CkCedCkNkeek 42 k+C+C++skClk+YC+Cfa+gk C+++ C C++C+N+ ++ Bobra.50_1s0059.1.p 149 GKPCKCRHSKCLKLYCDCFAQGKLCNKDwCICDGCQNNVDH 189 689***********************999********9875 PP | |||||||
2 | TCR | 47.5 | 3.6e-15 | 217 | 255 | 2 | 40 |
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k gC+C+ks+C+kkYCeC+++g++C+ +CkCe C+N e Bobra.50_1s0059.1.p 217 HKVGCKCTKSHCKKKYCECYQSGVYCAATCKCEACQNVE 255 788**********************************76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 380 aa Download sequence |
MTHRSPLENL KQSLFEARRA KLELRNLLSP FYPERNFEET SSVEIPGPSS VPGFSDARRS 60 VRALPKEMQS QACPGSDQGR LGGPWTVSRE RSVQSPSVET AFQDRSIDDT TGLLRRGGRP 120 RNPTRGTMSE TTQQKQCTSK PPQTSQTDGK PCKCRHSKCL KLYCDCFAQG KLCNKDWCIC 180 DGCQNNVDHP DEVERARNDA LVKDVNAFQP KVGTAGHKVG CKCTKSHCKK KYCECYQSGV 240 YCAATCKCEA CQNVEGAVFR PARKAGSRGL AAASSSEGAE RQLMRSDSAY GYNTCKVNVL 300 SNKRKFDEQD TGSNPSCNQD GSQPSERVTH PLPKRERFLP GSVTPGNEQE AAVAALLGLG 360 VNVEETHHHP FRKGPHGWR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20110.1 | 5e-26 | CPP family protein |