PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bobra.357_2s0025.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
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Family | NF-YB | ||||||||
Protein Properties | Length: 153aa MW: 17384.5 Da PI: 6.3579 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 182.9 | 2.5e-57 | 17 | 112 | 1 | 96 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkk 89 vreqdrflPian+srimkk+lP naki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa++tlGfedyveplk+yl+k Bobra.357_2s0025.1.p 17 VREQDRFLPIANISRIMKKALPPNAKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMSTLGFEDYVEPLKLYLHK 105 69*************************************************************************************** PP NF-YB 90 yrelege 96 yre e++ Bobra.357_2s0025.1.p 106 YREGEKA 112 ***9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence |
MSAAPDDGRD DGDERAVREQ DRFLPIANIS RIMKKALPPN AKIAKDAKET VQECVSEFIS 60 FITSEASDKC QREKRKTING DDLLWAMSTL GFEDYVEPLK LYLHKYREGE KANLQKQAAA 120 GMGSSNDVRK DGREDLPYMQ PNMYMQHHQQ HH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14540.1 | 6e-64 | NF-YB family protein |