PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.357_1s0021.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family NF-YC
Protein Properties Length: 189aa    MW: 20480.5 Da    PI: 4.2528
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.357_1s0021.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC53.74.5e-17581342098
                 NF-YC  20 elPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 
                            lP++r++ki+k+  dv+ isa+a  ++++a el++ +++ r+  h  +n+   l+  d+aaa++  ++f fl d+vp+
  Bobra.357_1s0021.1.p  58 VLPVSRVRKIIKQVIDVRAISADAVFVIARATELLLDDIAARAGQHVGNNN--YLEYDDVAAAIQGGKVFRFLRDVVPQ 134
                           69********************************************98775..6999********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MDIDDGDLGR SPQLSDQEGQ GGGSFISDRH VSGPARHICD TGELIPQDNQ KDKDSGLVLP  60
VSRVRKIIKQ VIDVRAISAD AVFVIARATE LLLDDIAARA GQHVGNNNYL EYDDVAAAIQ  120
GGKVFRFLRD VVPQRVSLKY LLEKLEQQDA FTRDGGGASD GDGDVDIDDL QEGRAGRWPE  180
EHGEDEDV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.16e-14NF-YC family protein