PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bobra.182_3s0062.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
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Family | SBP | ||||||||
Protein Properties | Length: 275aa MW: 29666.2 Da PI: 9.2343 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 92.1 | 5.9e-29 | 137 | 214 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C l+ + yh+r ++Cevh k p+ + +g++qrfCqqC+r hel f+ +krsCr +L+khn+rrr++++ Bobra.182_3s0062.1.p 137 VCQVKDCGRSLAPLTMYHQRSRICEVHLKLPSFMRAGKQQRFCQQCGRCHELAAFEGTKRSCRVQLNKHNARRRRQKE 214 6*************************************************************************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MCLLGGGSLP GVHQPWAMSD WNWDPFSMTA TTRTDGPDAR ASKRANIGAL AQGSIRMSGV 60 TRSNTGTGSQ SNMLDSKGQV WKELLSGDFN KNHSASERAS GRSDPSLPDE DSQERTGLEE 120 SQELSAGRLL GSLSNMVCQV KDCGRSLAPL TMYHQRSRIC EVHLKLPSFM RAGKQQRFCQ 180 QCGRCHELAA FEGTKRSCRV QLNKHNARRR RQKEKQERVK EGTRHGGRSG GGHVLPDSVP 240 LGLESPLGTG AASSEGMGAH SILNSTTESA EAVF* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 208 | 216 | RRRRQKEKQ |
2 | 226 | 232 | GGRSGGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43270.1 | 1e-17 | SBP family protein |