PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bobra.110_2s0037.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
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Family | bHLH | ||||||||
Protein Properties | Length: 306aa MW: 31793.8 Da PI: 4.991 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.6 | 1.6e-11 | 137 | 182 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h ++E+rRR riN+++++Lr+++P++ ++ + a Le ++eY++ L Bobra.110_2s0037.1.p 137 RHQAAEQRRRTRINERLDRLRDVVPHQ-----ERANTACFLETVIEYVNTL 182 599***********************9.....8**************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence |
MSRGSHVLKG AVPANFGIYF EANMPNGQGE DEEGPGEAMQ VAQVAMPVPA SAATPGMSGA 60 PTSQPAGLAA VLRNSAFMPV PPAAAQPFMP ELQLFSQFPQ LFSMHPLAAM AATQPENVGS 120 GRTRTGDSKS TSAYASRHQA AEQRRRTRIN ERLDRLRDVV PHQERANTAC FLETVIEYVN 180 TLKNKVAVLE AQLQAAGAQP ATELVTSSTV VQAPATEGLS YGDLPSSVPA AQPAESGMLP 240 HLTTTSLEQK VEIMPLGAPL EGVGPGSGSP ATPDGSFGHE AVLDAAFADS GEGDADGIPL 300 KKRRM* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69010.1 | 9e-12 | bHLH family protein |