PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bobra.0385s0002.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
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Family | C3H | ||||||||
Protein Properties | Length: 299aa MW: 33127.5 Da PI: 9.5644 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 32 | 2e-10 | 97 | 123 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 yktelCrf+ G C +Gd+C+FaHg+ Bobra.0385s0002.1.p 97 YKTELCRFHGTIGGCGRGDKCTFAHGE 123 9************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence |
MVLVHSSSLA PLRHARAPLL TLTSDPSVDD LHSCFYLAQL EGRGPITFYS VASCVNVPGR 60 PGARCWPHLP QNSRPNSHVY TYSKLHYMLA QDITPRYKTE LCRFHGTIGG CGRGDKCTFA 120 HGERELRSPS ERSARHTSTD SSPGSLHATG SGVLYRGSPV QACPELKTCS NILSPAQNVM 180 RQKVHAQLSS GTASAAHNWL RARRDEHASA KFAKCNKNVT LFQEIINCVY ADVEGESRFQ 240 CLINFEETTW RFKTEFCRNY RTRPRLQGNR SKYAHGSREL RSLSGGLPTV AYPMGLTS* |