PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0337s0022.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family ERF
Protein Properties Length: 365aa    MW: 39396 Da    PI: 9.337
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0337s0022.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59.3e-20114164256
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                           y+GVr+++ +g+++AeIrdp+e   + r +lg+f taeeAa+a+++a+++++g+
  Bobra.0337s0022.1.p 114 PYRGVRQRP-WGKYAAEIRDPRE---KSRKWLGTFETAEEAARAYDKAAREIRGN 164
                          7********.**********965...5*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MLGRLEPNFD IFKPAVPLTE MGAPTGQTLD PVNPTQVQEQ NGTVSCQKGL EGVPLVLQTK  60
PPTPVSINRR SKQPSSPDKS HSSGLGPKGK NQKKKQPKLD QKVLAAGRTG PKTPYRGVRQ  120
RPWGKYAAEI RDPREKSRKW LGTFETAEEA ARAYDKAARE IRGNAARVNF PEAGTADANR  180
GVVTPDTQNL DRPSDPQNVP AAASLAAVSE PIEVGGSSAR PPMRHMSRSA EDMNELLDQS  240
MRACSRERER ATWYSEEKSL SLASSGKLIY TKARHFPSYD DLPGGIDPGI HLAKSFERIH  300
LGDNKSSCRG FSGGGCCAGS SPQPSDTPMS VSSNFSWGHG SSGELHYQIE GLLGQIYDSQ  360
QSTC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43160.12e-17ERF family protein