PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0337s0016.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family SBP
Protein Properties Length: 430aa    MW: 46583.1 Da    PI: 5.2125
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0337s0016.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP91.58.9e-29137214178
                          --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
                  SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                          +CqvegC++dl++   yh+r +vCe+h+k  + + +g++qrfCqqC+r h+ls+f+ +krsC  +Lakhn+rrr++q 
  Bobra.0337s0016.1.p 137 VCQVEGCSQDLTNETAYHKRCRVCEKHAKVLEFTRNGRQQRFCQQCGRCHDLSKFEGNKRSCTAQLAKHNARRRRRQR 214
                          6*************************************************************************9875 PP
2SBP48.22.9e-15376421247
                          -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTS CS
                  SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCs 47 
                          Cqv++C+ +l ++  yh+r ++Ce h k p  + +g+ qrfCqqC+
  Bobra.0337s0016.1.p 376 CQVDDCRRNLLHLSLYHQRCRICELHIKVPFLMRRGKLQRFCQQCG 421
                          *********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    
MMADPGPPPN LCDIISAGDE RTWSLADWNW DPENFVATKK SEGKEFCGQP VLEVEERRGH  60
PPPNKPCTAA NNCALNSIAG GLIGASVVSN TGSNARDGSF VTANPPWPIP TGRDGHAGGD  120
MAEEKDTQDE VPSGAMVCQV EGCSQDLTNE TAYHKRCRVC EKHAKVLEFT RNGRQQRFCQ  180
QCGRCHDLSK FEGNKRSCTA QLAKHNARRR RRQRTSEDSK PPDMQILDDV DPMACGSNLG  240
LLSAFDSTRG GEQEGRIPPE TGALESVANI PEVGFPAVSA PTPATASNDL EMVSELPDFT  300
YATFMDLLMP ATLDGNEMSL VSQPETRIPA SGIPNASSPK SSPQQESSED EAGDASASEA  360
FGWKGGIGSS SAQPLCQVDD CRRNLLHLSL YHQRCRICEL HIKVPFLMRR GKLQRFCQQC  420
GPLPRAQEV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.13e-12SBP family protein