PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0297s0001.2.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family ERF
Protein Properties Length: 306aa    MW: 33319.8 Da    PI: 8.8822
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0297s0001.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44e-1983132255
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                          +y+GVr+++ +g+++AeIrdp++     r +lg+f+taeeAa a++ a+++++g
  Bobra.0297s0001.2.p  83 KYRGVRQRP-WGKFAAEIRDPTK---GSRQWLGTFDTAEEAALAYDDAARRIRG 132
                          8********.**********965...39************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MSPDAEFWHP GPPMGSSAPS AYPRRVHHLP AGGSTPERDD GRRSRSSTPG GMLNGRRLAA  60
GGGVKKASTP TPRHMATKDR PVKYRGVRQR PWGKFAAEIR DPTKGSRQWL GTFDTAEEAA  120
LAYDDAARRI RGPHAICNFN KDDRPLIYRE GRPYHVDGFL PDGQPSLSPV EMGGSPVTFE  180
AGSSAPASFP VFPQSRPHRA AASTRAPSLY SSRSRLQQSS LPSGQSEGNY SPLPDPTFHR  240
NIPKGTWGRT YSEPGGQQRG WHAPSQDSAD YDEYMAGEMD VEEEDQRAEE VADILIQMAN  300
LNPTG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43160.14e-17ERF family protein