PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bobra.0226s0048.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
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Family | bHLH | ||||||||
Protein Properties | Length: 332aa MW: 36248.1 Da PI: 5.31 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.7 | 4.3e-13 | 125 | 182 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC.......TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkas....kapskKlsKaeiLekAveYIksLq 55 +++h+ +E++RRdriNs ++eLr+l+P + + K K +L ++ +k+Lq Bobra.0226s0048.1.p 125 KESHSTVEKQRRDRINSLIDELRDLVPAQNagvaVNEEVKRPKHVVLSDTIALVKELQ 182 789*************************666999666666777777777777766666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence |
MAGQALQTEF DYHFTEKELT DLLQYIQSDP PEKLTSLPVP SFFPESGNPP SLSLQFHPHP 60 PLVLGIPANS SPGLVADQAP LSLYTSAADL PGTITPPPDS TVGIGLSRTP PLNANTKKGD 120 HKSSKESHST VEKQRRDRIN SLIDELRDLV PAQNAGVAVN EEVKRPKHVV LSDTIALVKE 180 LQGKAKSEDT GKAESQEQQS ENRNKADVLV KSEEVSADAP QDFKQLGSEK LLEGVTIEED 240 GGVNRHLRLR VVCKDRRGLL LDLIAVLKPL PVQIIGASVR TMSDGLVHDV FSVEVDTEHE 300 ERKQEVKCQM LEKLKGLIGE GEPNEKRLKV I* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09820.1 | 3e-07 | bHLH family protein |