PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0206s0034.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family bHLH
Protein Properties Length: 377aa    MW: 40119.2 Da    PI: 6.5278
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0206s0034.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.21.6e-09173222254
                          HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                          r ++ +rEr+RR+r+N++f eL  +l +    ++ K++K +i   A++ + +L
  Bobra.0206s0034.1.p 173 RGNKAQRERQRRERLNESFMELSHVLDPG---KQAKPDKTTIISDAIKLVVQL 222
                          78899*****************9999998...9**************977665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MKRTAKYAAQ QRDFQTAVVA FATTATPSVW MDHLPDISPP DGFLSFTPNP WEHSILSGSL  60
DELSLNNGPS GSSMLLDGLP TEAFAPSTGV ASSGAEPQRK RAREEEAERN KAINEASLET  120
YLAGLAADGT EAVKKTEGAG DDDDLGKDSS MSLGRPDLDR RKVDKVDSVH LARGNKAQRE  180
RQRRERLNES FMELSHVLDP GKQAKPDKTT IISDAIKLVV QLRAENGQLK QLNKFLEERV  240
QTTEKQRMEL QVNLTNLRQQ LTHGGLMGNM GMGMGGFALG QPVNMGPAGK PQSEIVAAYG  300
SQQQAGLGGM MFGMPQAGTF MDSGGGAHLR GIVEGVPVGA LPGAQMMHSA ASGPSSLLPP  360
HTLDISKDGA RRPPAA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1181186RQRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51070.12e-12bHLH family protein