PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bobra.0201s0013.1.p

Organism

Botryococcus braunii

Taxonomic ID

38881

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus

Family

CAMTA

Protein Properties

Length: 1409aa MW: 154197 Da PI: 7

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bobra.0201s0013.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	153.3	5.6e-48	33	149	2	117
CG-1 2 lkekkrwlkneeiaaiLenfekheltl..elktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahse 89 +k k+ wlkn e++++L+n++++++ +++++p+ gs++L++rk vr+frkDG++w+kk dgktvrE+hekLKvg+ ++l+cyYah++ Bobra.0201s0013.1.p 33 TKGKTSWLKNPEVCELLMNHASYNMPIsrDAPNQPPGGSIFLFDRKAVRFFRKDGHNWRKKADGKTVRETHEKLKVGNQDMLNCYYAHAN 122 56699****************97665699******************************************************* PP CG-1 90 enptfqrrcywlLeeelekivlvhylev 117 ++ +qrrcywlL +e ++ivlvhyl+ Bobra.0201s0013.1.p 123 QDDGLQRRCYWLLSSE-DDIVLVHYLNI 149 ***********9.******985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1409 aa Download sequence
MDTRNKQAPS GGAAVPIDPS DPNLLPKVRE ILTKGKTSWL KNPEVCELLM NHASYNMPIS 60 RDAPNQPPGG SIFLFDRKAV RFFRKDGHNW RKKADGKTVR ETHEKLKVGN QDMLNCYYAH 120 ANQDDGLQRR CYWLLSSEDD IVLVHYLNIE KDKSGVRKNE NINDFERTRS RTSNFSASSS 180 GNFGPGLAGL IPGLTGLPGD ASQSFLPLTA SLQGGIGSLF DLYSQTEENA VRRELQQGSS 240 YVDNLLPNAW GTIRNGGGAG LDPGLPDWSS HPSMLTNDLN DQAHLVEHAG SLRLIELGFP 300 EDPWSSDLAN AMRTPSLEMR IQSSELRQNL RARQQSMERN ALMGIPHNNL FSGGTNSRAA 360 LGLGNLNLGA PNMFGNVPPR PGAQGRGPGQ AFPRGPQGLD QDRGMKVSQR PYTGMNGAGL 420 PLGQASNSLQ MLQQQHFQQQ LDMQLAQAMN TAAVQQQQHQ QDQQLLNSAA DLNAVYVRQQ 480 QQQQQQQQQQ HQGRMGINQW ANDLVAGTLP IGHSDRLGDL SGLPAHVLMG HGPLAPQPLT 540 DQNQGFPRAL SEGHHPIQMM APPPAEQAPQ QNLLVEMNEP TQQMWRGNNT FRTGQVLAME 600 RQLNDIDRQT MEALMTSRSG KLNSQASTSH VIDSKVKTLE DKLERLEAGS QMIFSGALPS 660 QPSESGGQRS VTMRTPSAGG IEVSQQMSPG DSTESRREDE RQTSQRPPSS LRNGLSASAD 720 SIPFELVDFT PDWDFTVGGA KMILTFKTSD VSIAERQLVV MFDEDQVPGT VICQGAVRCH 780 VPPHEVGTVK LCVATEDGVP LCRPQPFTYR LPADAPRVAD AMALVTQPDR ELQLHLVNML 840 LAVAPSHSDG ASDTRTSGHS ISAEGSRQHR TPNPGTPSPS EDEPVVMDGQ GNLAALDVHQ 900 LEKLLILLLE RKFKFLASLP DGRDASLPRS KPTQSRDVLS QLSPGGVGLI HFAAALGYDW 960 AVNILLQGGA NVQLKDAWGM TPLHWAAMRG HERTVALLIV RDASVDLLSF PTQKRSGRTA 1020 ADLASQNGHP GMAAYLAELT VMEHLEKQDK KIMSDGLSGT DEESHKPEFH RPGSAPHRRK 1080 RTRAPLGVDV PTDWGSPGCS ENSPVSVDSN KGLDNGIRGN AAKVVARVKW AVKFLHQSRG 1140 RQVARKARLE ERRQRLAQRE GEALSRIGES LKVWDEMQNI AKQELDHSEA SDSLLRRFIT 1200 LGERITRLNR TFKGALTHRD YGLAGSDTEE PEEGWRAERD RGKIADYGSD SDVQMIRGDS 1260 LSSARRLQQL HNSRRKNSLT GIKGMGVSDQ ELRAFLKGGG PSAAANPPDV SLTELRKQLR 1320 EDSLLSSISL SPSTELAPIP ATANTDVPET SLTPDLRAVL QYVEVLLGDP GAWDEYLRME 1380 SLVEHLKAQP LPRKFLRTAS NNAVIITI*

Sequence ? help Back to Top

Protein Sequence Length: 1409 aa Download sequence

MDTRNKQAPS GGAAVPIDPS DPNLLPKVRE ILTKGKTSWL KNPEVCELLM NHASYNMPIS  60
RDAPNQPPGG SIFLFDRKAV RFFRKDGHNW RKKADGKTVR ETHEKLKVGN QDMLNCYYAH  120
ANQDDGLQRR CYWLLSSEDD IVLVHYLNIE KDKSGVRKNE NINDFERTRS RTSNFSASSS  180
GNFGPGLAGL IPGLTGLPGD ASQSFLPLTA SLQGGIGSLF DLYSQTEENA VRRELQQGSS  240
YVDNLLPNAW GTIRNGGGAG LDPGLPDWSS HPSMLTNDLN DQAHLVEHAG SLRLIELGFP  300
EDPWSSDLAN AMRTPSLEMR IQSSELRQNL RARQQSMERN ALMGIPHNNL FSGGTNSRAA  360
LGLGNLNLGA PNMFGNVPPR PGAQGRGPGQ AFPRGPQGLD QDRGMKVSQR PYTGMNGAGL  420
PLGQASNSLQ MLQQQHFQQQ LDMQLAQAMN TAAVQQQQHQ QDQQLLNSAA DLNAVYVRQQ  480
QQQQQQQQQQ HQGRMGINQW ANDLVAGTLP IGHSDRLGDL SGLPAHVLMG HGPLAPQPLT  540
DQNQGFPRAL SEGHHPIQMM APPPAEQAPQ QNLLVEMNEP TQQMWRGNNT FRTGQVLAME  600
RQLNDIDRQT MEALMTSRSG KLNSQASTSH VIDSKVKTLE DKLERLEAGS QMIFSGALPS  660
QPSESGGQRS VTMRTPSAGG IEVSQQMSPG DSTESRREDE RQTSQRPPSS LRNGLSASAD  720
SIPFELVDFT PDWDFTVGGA KMILTFKTSD VSIAERQLVV MFDEDQVPGT VICQGAVRCH  780
VPPHEVGTVK LCVATEDGVP LCRPQPFTYR LPADAPRVAD AMALVTQPDR ELQLHLVNML  840
LAVAPSHSDG ASDTRTSGHS ISAEGSRQHR TPNPGTPSPS EDEPVVMDGQ GNLAALDVHQ  900
LEKLLILLLE RKFKFLASLP DGRDASLPRS KPTQSRDVLS QLSPGGVGLI HFAAALGYDW  960
AVNILLQGGA NVQLKDAWGM TPLHWAAMRG HERTVALLIV RDASVDLLSF PTQKRSGRTA  1020
ADLASQNGHP GMAAYLAELT VMEHLEKQDK KIMSDGLSGT DEESHKPEFH RPGSAPHRRK  1080
RTRAPLGVDV PTDWGSPGCS ENSPVSVDSN KGLDNGIRGN AAKVVARVKW AVKFLHQSRG  1140
RQVARKARLE ERRQRLAQRE GEALSRIGES LKVWDEMQNI AKQELDHSEA SDSLLRRFIT  1200
LGERITRLNR TFKGALTHRD YGLAGSDTEE PEEGWRAERD RGKIADYGSD SDVQMIRGDS  1260
LSSARRLQQL HNSRRKNSLT GIKGMGVSDQ ELRAFLKGGG PSAAANPPDV SLTELRKQLR  1320
EDSLLSSISL SPSTELAPIP ATANTDVPET SLTPDLRAVL QYVEVLLGDP GAWDEYLRME  1380
SLVEHLKAQP LPRKFLRTAS NNAVIITI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	7e-43	CAMTA family protein