PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Bobra.0192s0011.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
|
||||||||
Family | NF-YB | ||||||||
Protein Properties | Length: 249aa MW: 25757.2 Da PI: 6.2916 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 42.8 | 1.3e-13 | 54 | 126 | 24 | 96 |
NF-YB 24 nakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 + +iskda e + fis++t+ a+d+c r kr+ti++dd++ al + f + v pl+ l+ ++ +e Bobra.0192s0011.1.p 54 EIQISKDALLACSESAKVFISYLTATANDNCIRAKRQTISADDVIAALNDTDFTELVGPLRESLEAFKVESKE 126 5689**********************************************************99999865554 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 249 aa Download sequence |
MQPANGPAAV GSGLQGKTDE PDLPKALVKK ILKAKLASLD QEKKLGGSRK PTGEIQISKD 60 ALLACSESAK VFISYLTATA NDNCIRAKRQ TISADDVIAA LNDTDFTELV GPLRESLEAF 120 KVESKEKNKA KAEQLKKRKL EKEEANRAAE DGADGFAEAG EGFFPSSSAG QLNQGSPAVP 180 LLTNSSRPLS ASTLGSPGLL LAPGVGSLGL SPGVFGAIDN LPHHMLDSPD LLPLGRTVHA 240 PGSPGDLV* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G27470.1 | 7e-22 | NF-YB family protein |