PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0179s0048.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family ERF
Protein Properties Length: 498aa    MW: 58011 Da    PI: 8.1777
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0179s0048.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.16.7e-1154100152
                  AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52 
                          s++kGV+w+kk+++W A I+       r++ +lg +  +e+Aa a++  +++
  Bobra.0179s0048.1.p  54 SKFKGVSWHKKSNKWQACIKIN-----RTTKYLGLHEREEDAAIAYEMEARR 100
                          79****************9994.....5******************977665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 498 aa     Download sequence    
MWDRVKYKVC SSKQREYPRE VQARLTDEDR AELEAMSLQD LIEKYKNLRK ERTSKFKGVS  60
WHKKSNKWQA CIKINRTTKY LGLHEREEDA AIAYEMEARR QGRTKKWKFP ESLEGAHAQS  120
HQQPEDQQEE QRQAREETGR QPWPQSCQEP QDQSLRQNRF GPLGWPRVQD WESGKQANRH  180
DPLSGHLQLH DSERLRNEPK EQARVQPPVE SSQVQQTLLE HGQVRYPPDF YQQALPSDLH  240
QRPYQAPATD SFVQKANYRR HHNSSGTRLT HQWDATHTYQ PFILSTLLRV TVLPSPLQWG  300
TSDTAHCKIP STSGHYTLQN PQHDGRYTLQ NPQHVGHYTM QNPQHDGHCA LQSPQHVGHY  360
TLQAHQEIAY GNEKSGRHSY EQPLRQSRVQ SFRQPTFCKY SRPRVQVGDQ RSRHYDPLQG  420
QLQVHDSEYP RNGPQEQTRG LPHVLPSEAQ EYVGTYDGDA TQPYNNMLQD LPQYQSQETS  480
AILPNFDELY YGTLPGP*