PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bobra.0165s0086.1.p

Organism

Botryococcus braunii

Taxonomic ID

38881

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus

Family

C2H2

Protein Properties

Length: 393aa MW: 42417.1 Da PI: 5.7147

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bobra.0165s0086.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.5	0.00094	174	197	2	23
EETTTTEEESSHHHHHHHHHH..T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt..H 23 C+ C+k + +L++H+++ H Bobra.0165s0086.1.p 174 YCETCHKQYEKAAELEVHLSSydH 197 6*****************998665 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MQGSGFTFNG VEVVDHRFQV GRGQEFSASR LREKQEEQWF GDEDNWSLPI GTRIEESLDR 60 TGLEMASLDQ HISSDNVGFR MLQRMGWSEG KGLGRKEDGI LEPVRGGVDP GVRLGLGKAE 120 QDNFFTSAEN VVRKRLEVEV QAEEDEDRRN RREMQVEREA KIREDVTDIK RTLYCETCHK 180 QYEKAAELEV HLSSYDHHHK KRLQELRQSE AERTRYEREK RERKRMEKEQ AALMKQVARA 240 HQSRGSADHL AQPPLPEGPP PPPPPLPDGA PPAVPGGWPG APGQGEWGPP PTPEESTGWG 300 ASGDASGWGG GAGQAASAPP QPPPPAPKVG GFSLGPAKAG TLGASAGKAG AGGAISFGMA 360 AKPSAGPGRF GGGLSKAKPA MAAFQLDSDE DD*

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MQGSGFTFNG VEVVDHRFQV GRGQEFSASR LREKQEEQWF GDEDNWSLPI GTRIEESLDR  60
TGLEMASLDQ HISSDNVGFR MLQRMGWSEG KGLGRKEDGI LEPVRGGVDP GVRLGLGKAE  120
QDNFFTSAEN VVRKRLEVEV QAEEDEDRRN RREMQVEREA KIREDVTDIK RTLYCETCHK  180
QYEKAAELEV HLSSYDHHHK KRLQELRQSE AERTRYEREK RERKRMEKEQ AALMKQVARA  240
HQSRGSADHL AQPPLPEGPP PPPPPLPDGA PPAVPGGWPG APGQGEWGPP PTPEESTGWG  300
ASGDASGWGG GAGQAASAPP QPPPPAPKVG GFSLGPAKAG TLGASAGKAG AGGAISFGMA  360
AKPSAGPGRF GGGLSKAKPA MAAFQLDSDE DD*