PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0162s0041.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family CPP
Protein Properties Length: 295aa    MW: 31471.6 Da    PI: 6.7484
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0162s0041.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR22.22.9e-07259293438
                  TCR   4 kgCnCkkskClkkYCeCfaagkkCseeCkCedCkN 38 
                          +gC+C+k  C ++ C C  +g++C+  C+C +C N
  Bobra.0162s0041.1.p 259 RGCECRKNGCRNNNCWCRRSGRHCGWACNCLNCVN 293
                          79*******************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MVDSLTNWGD EDAVNEGLGP IAHPGAEAHN AHVDDDGLQV NPDQQDEPLL PVLPFPGQPG  60
PGPLPLPPNP VAPPAPPAPL AGAPIPAHQL QPLLLPQAVH HLQALHLEAL HLAHHLQALH  120
DQLALDHHLP QLQQQQPLPQ AQALFFDQAF PQLQQQQQPL PQTQALFLHQ TLPQLQQQQP  180
LPQAHQVVQA AAPHQAGAAN PAQARAAAPS PPLDLRQQAA AAEQVPTAKR KGASAIERTP  240
SAQPPAGVLA AATPRLEPRG CECRKNGCRN NNCWCRRSGR HCGWACNCLN CVNR*