PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bobra.0141s0053.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
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Family | bHLH | ||||||||
Protein Properties | Length: 912aa MW: 96170.4 Da PI: 7.6249 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.9 | 8.8e-09 | 63 | 108 | 2 | 51 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYI 51 r+++ + E+ RRdri ++++ Lre+lP + K++ + L++A +YI Bobra.0141s0053.1.p 63 RAKNRKTEQERRDRIHEGLQALREVLPLV----HSKMDQQQLLRHAARYI 108 88999***********************7....79*************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 912 aa Download sequence |
MGISEEGGQE AAEEHRRTEE TQTKAGEEGS LEADVNVRKA RKRRAGNLAP ESKERDSWRE 60 QARAKNRKTE QERRDRIHEG LQALREVLPL VHSKMDQQQL LRHAARYITA TKSLLHQAQA 120 LGAMAGWPEP QQAAVSRLLS QDSYPADGLG QGVRSTAISL QGPPSLGSEG HSSPSKGTKG 180 LLASGQDMEK LTLPLAAVAL KGQLPGGLEG SSTSGTSGTA NTRSLEGNTS SAGLQELTAV 240 RLGLRCPGSL DGARPLGDPG PRFLPGDPSM ATSGHGSEAL QPMQIDSPSR LPEFMSCMEA 300 RDPSVGTGGG SPQLGTAART QSQSLPPGIP RTPFGEGTVR DIASSPQPDF RSRSMSQPSE 360 YEAILRSGGT GSKPTFLTSQ PRKSRLASRG SVPVHLPSTG RPAPPLLQRA PSWGPPAVPS 420 ERWGLWETSA PMPLPDPGFS AFNMAQPQET LQALAAGGTT APHLSILGGG PSEYEKPHQL 480 PVMGTGQGPG GPIGARPGSP IPQMPEQPPW TPPRAPDSVL QFSPWQGLGT MQYMYSPPLA 540 GVPQQSPGQQ QQGGSFVQQV GDMNVNPQGY IMHLHPPTSQ QAPQGFPYPA YGFSLPTSPM 600 GTAPAHPYVG PPGSLLTYSA VLPGQASGYA VYSPDQAMGS TGTVGGIPAP EGYPGFRGGQ 660 GISTAYATGQ AYNLQGQEAL RGQLQYAPGP PQQRMQYSGG TSSAQQDMLM QQQMSYQMQP 720 GFGGGGVAGG MVQYMQPGVQ YMQPGAQASA VPGFPSQMQE GRYGGRIGQG IPRVTSGIML 780 PPGPPEEHLP QSRRRGRRQE GRLSSEGAEV GAPHLEPPLE EMTGGIPHQV REQDSFPQSM 840 LHILHAPGSP RMGGAGGQSP VGDRFPLPNL SGDSFLPEGW HREGHLSNSF LPDLPPDPRD 900 QQAESRRRSF G* |