PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bobra.0129s0014.3.p

Organism

Botryococcus braunii

Taxonomic ID

38881

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus

Family

SBP

Protein Properties

Length: 1130aa MW: 122630 Da PI: 6.2698

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bobra.0129s0014.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	98.9	4.4e-31	28	105	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve C adl+++key+ r+k+Ce++ k +++ +g++qrfCq C+rfh+++ fD +krsCr+rL++hn+rrrk+++ Bobra.0129s0014.3.p 28 RCQVETCCADLTDLKEYYLRYKICEKCQKLRSIIRDGKRQRFCQLCGRFHNIEAFDGDKRSCRTRLQRHNARRRKQKP 105 6**************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1130 aa Download sequence
MQFTNCRLGP AGAIMMPALA ARKQETLRCQ VETCCADLTD LKEYYLRYKI CEKCQKLRSI 60 IRDGKRQRFC QLCGRFHNIE AFDGDKRSCR TRLQRHNARR RKQKPDSTSQ GPTGSGTMDV 120 DQPLGADDVA SSKKKRVNSR VAATREMAPE VCRSASSQLP GAHTFRQPEH IFRQMQLSQP 180 TPSWPKLEDK AELDCLGGSP CEQGADVVKA SSPGTSRPSA SWGQGSQQDG RGSTPGRSSP 240 HSQVSELVSK PSMSSSSPGT HLVPEVGGWP ADYTMQLRLP AISKHDWAVS APSPSMINKP 300 HFMTAEMASM QQPIGGVSAG QKSLDMLDMI HMPDIVEPDS IFPMRLVDMS RSCDDMHPFA 360 PGVSDCGPTE PSWGNEIMPM GTAGNDVSGA LPWSWQPQQH IPQVPHTCPV TPVMHPIPGV 420 DIPFPVAPEE FSNPAYATLH TLGSPVDLAY DTSMCPGSTA WAARPMEHSL PSSSGDVCSE 480 LADAHNLLNA SFHVNPIEVR ARFSAKISHI TPDDLPRNLH QQLVDLMPVT MNGVTGYVRP 540 GCVYLTVAFG VDAADAKTLQ ASSILQALDH LMSLPHAEFW RLQTAVVQLY NELVLIRGGQ 600 VVRTLDLELS SAVNPCLTKV LPVAVKQGTT SILTLLGRNL DCPDCVIVAR SQGQQRYLQR 660 LEESRGAAPA DGNAGDSLRV ILPPDLPPGG LQIEVACKAY LTDFQVVLIL EKQDVIEEIR 720 QLEIDSTCMD ETNSILLDFD RVIELLRVSA AVKAGRYVRL PYKPNYAILV KLAQRLFVIA 780 TRKGWPTVAR TVLGVACMQA QSIVDVVRSM HTMSHGLSLL HLAVCSGNPK MVEFVLEWTS 840 SAGLELSAAA PSAGGFTPLH LAALHNDDGK MAVTLTTLCV DGKDAWKVAG KLLTPFDLAQ 900 LAGTADQIQK RLIEAAREIE EMTAAHDAAV LKDDLLDGSD EEYPSTDTDC DSVNSDDPDC 960 LNSRKEMASS GSKHSSSAPQ VAEEECEACC SSLMARKNCQ KELSAPRAAV FPEEEPASLK 1020 SNRRLIGADY NLLPSPKKVS HYSVSKSEAE GKKGALWRGL EKPGVQRPGA SHSYGSIQTY 1080 QQLLQEADSD EEDFNSKSSG IFIYACIPTV NNLHLYGPGN PLQSLLSTI*

Sequence ? help Back to Top

Protein Sequence Length: 1130 aa Download sequence

MQFTNCRLGP AGAIMMPALA ARKQETLRCQ VETCCADLTD LKEYYLRYKI CEKCQKLRSI  60
IRDGKRQRFC QLCGRFHNIE AFDGDKRSCR TRLQRHNARR RKQKPDSTSQ GPTGSGTMDV  120
DQPLGADDVA SSKKKRVNSR VAATREMAPE VCRSASSQLP GAHTFRQPEH IFRQMQLSQP  180
TPSWPKLEDK AELDCLGGSP CEQGADVVKA SSPGTSRPSA SWGQGSQQDG RGSTPGRSSP  240
HSQVSELVSK PSMSSSSPGT HLVPEVGGWP ADYTMQLRLP AISKHDWAVS APSPSMINKP  300
HFMTAEMASM QQPIGGVSAG QKSLDMLDMI HMPDIVEPDS IFPMRLVDMS RSCDDMHPFA  360
PGVSDCGPTE PSWGNEIMPM GTAGNDVSGA LPWSWQPQQH IPQVPHTCPV TPVMHPIPGV  420
DIPFPVAPEE FSNPAYATLH TLGSPVDLAY DTSMCPGSTA WAARPMEHSL PSSSGDVCSE  480
LADAHNLLNA SFHVNPIEVR ARFSAKISHI TPDDLPRNLH QQLVDLMPVT MNGVTGYVRP  540
GCVYLTVAFG VDAADAKTLQ ASSILQALDH LMSLPHAEFW RLQTAVVQLY NELVLIRGGQ  600
VVRTLDLELS SAVNPCLTKV LPVAVKQGTT SILTLLGRNL DCPDCVIVAR SQGQQRYLQR  660
LEESRGAAPA DGNAGDSLRV ILPPDLPPGG LQIEVACKAY LTDFQVVLIL EKQDVIEEIR  720
QLEIDSTCMD ETNSILLDFD RVIELLRVSA AVKAGRYVRL PYKPNYAILV KLAQRLFVIA  780
TRKGWPTVAR TVLGVACMQA QSIVDVVRSM HTMSHGLSLL HLAVCSGNPK MVEFVLEWTS  840
SAGLELSAAA PSAGGFTPLH LAALHNDDGK MAVTLTTLCV DGKDAWKVAG KLLTPFDLAQ  900
LAGTADQIQK RLIEAAREIE EMTAAHDAAV LKDDLLDGSD EEYPSTDTDC DSVNSDDPDC  960
LNSRKEMASS GSKHSSSAPQ VAEEECEACC SSLMARKNCQ KELSAPRAAV FPEEEPASLK  1020
SNRRLIGADY NLLPSPKKVS HYSVSKSEAE GKKGALWRGL EKPGVQRPGA SHSYGSIQTY  1080
QQLLQEADSD EEDFNSKSSG IFIYACIPTV NNLHLYGPGN PLQSLLSTI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53160.1	8e-23	SBP family protein