PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0077s0073.2.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family bHLH
Protein Properties Length: 305aa    MW: 31134.1 Da    PI: 6.2855
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0077s0073.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.54.9e-132370355
                         HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                         + h   E++RRd+iN++++eL++llP       +K++Ka  L +A eY ++Lq
  Bobra.0077s0073.2.p 23 QRHVVTEQKRRDKINEGYAELQQLLPCT-----EKVEKARLLMQAAEYTRQLQ 70
                         568999*********************8.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MGDDEGQQAR KSQKVCGTQV ASQRHVVTEQ KRRDKINEGY AELQQLLPCT EKVEKARLLM  60
QAAEYTRQLQ AAMQQLVDSD ASSRLPDDLQ YAIRKLLPPK QGQGSTGGGT AGSSGLNPVD  120
PQDPLALLAE HAQQAQDSEW AEKAAAEAAA AAASQAAAPA SAPPLAVPLV AGLLGQAPLL  180
QPLQANMQLI QQLQLQALQG QVAGLPALAG AGLAGVPGLQ SLLAAPALQS LLATNLAAGF  240
QPVVAPPAPA DPGNEGGTGE GGPAPAKRKA ATKARQHSTS AKLAKEENSS PREDAGGRPG  300
VQPT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67110.11e-09bHLH family protein