PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bobra.0059s0003.1.p

Organism

Botryococcus braunii

Taxonomic ID

38881

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus

Family

bZIP

Protein Properties

Length: 640aa MW: 69364.1 Da PI: 7.4583

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bobra.0059s0003.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.1	2.5e-10	301	334	7	40
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKkaeieeLeekvkeLea 40 +r+++NReAAr+sRqR+k+++ +Le++vk L + Bobra.0059s0003.1.p 301 VKRLAQNREAARKSRQRRKQYVIKLEDEVKRLRS 334 58****************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 640 aa Download sequence
MEQPAAGPGR EVEGKRRRNA LACQSSAGAH LRESFGALVQ PTIENIENRG EGECLRPWRG 60 SPLPTDEAAT PSGPLGALPS GPPGALLASK GLDLTGRRPS ADSSGLLFGL GSSTTAFTRV 120 DSNRLPGGTG ASEQGRTDFD TSSHGQSHGG VDRSRRTSDD VLMSIRSLES TGPSQPLRAR 180 YDVGLGQEAP TEPQALDGRG SRVIAPTSAV PRSVAPHAGM AQLWVGGALT PAHPTDSAAW 240 GDPRTPGFPH QVPASTQRMA DSLDGIQDTA MNYRTDYEGD DNDFSEGGPE EGQKGTRERH 300 VKRLAQNREA ARKSRQRRKQ YVIKLEDEVK RLRSVIQRQT LAAGTGPVVP PPNVRFGAVD 360 VVGAPVTGPP PHALGPSTMG QTPPWLLPPT PVPESPSHTP QDVDVLKSLC KWRDDHVKTA 420 MAVKRLLDEI EATPELARGW EPRLQPLVEE ARAQVWTLHA MKRVIIYSES VTLILNLEHM 480 LPAERMGAWL GTWKPSIACQ GVISKLDRNL DNAKRRSLSE LKEDLAVQEK VLQGGFDQMM 540 PDVVVKAGTA RLNLSEDQKC SKEWDSQAHE AVLKGIKTVL HSADNLWDYF FKKTEPMLAM 600 HEYAVVVTSM YDFFTQLTNA SEAWKTRPSS AMQGKKGDP*

Sequence ? help Back to Top

Protein Sequence Length: 640 aa Download sequence

MEQPAAGPGR EVEGKRRRNA LACQSSAGAH LRESFGALVQ PTIENIENRG EGECLRPWRG  60
SPLPTDEAAT PSGPLGALPS GPPGALLASK GLDLTGRRPS ADSSGLLFGL GSSTTAFTRV  120
DSNRLPGGTG ASEQGRTDFD TSSHGQSHGG VDRSRRTSDD VLMSIRSLES TGPSQPLRAR  180
YDVGLGQEAP TEPQALDGRG SRVIAPTSAV PRSVAPHAGM AQLWVGGALT PAHPTDSAAW  240
GDPRTPGFPH QVPASTQRMA DSLDGIQDTA MNYRTDYEGD DNDFSEGGPE EGQKGTRERH  300
VKRLAQNREA ARKSRQRRKQ YVIKLEDEVK RLRSVIQRQT LAAGTGPVVP PPNVRFGAVD  360
VVGAPVTGPP PHALGPSTMG QTPPWLLPPT PVPESPSHTP QDVDVLKSLC KWRDDHVKTA  420
MAVKRLLDEI EATPELARGW EPRLQPLVEE ARAQVWTLHA MKRVIIYSES VTLILNLEHM  480
LPAERMGAWL GTWKPSIACQ GVISKLDRNL DNAKRRSLSE LKEDLAVQEK VLQGGFDQMM  540
PDVVVKAGTA RLNLSEDQKC SKEWDSQAHE AVLKGIKTVL HSADNLWDYF FKKTEPMLAM  600
HEYAVVVTSM YDFFTQLTNA SEAWKTRPSS AMQGKKGDP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	1e-06	bZIP family protein