PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bobra.0047s0045.1.p

Organism

Botryococcus braunii

Taxonomic ID

38881

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus

Family

ERF

Protein Properties

Length: 617aa MW: 68955.6 Da PI: 7.9418

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bobra.0047s0045.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	43.3	8.8e-14	161	213	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ dkk+g+W+++I++ + + +s+g+f+ + e a+a+++a+ +l g Bobra.0047s0045.1.p 161 SHYRGVCKDKKKGKWRVQIKVA---NlGKSGVSVGYFDNEAEGARAYDRAAIALLG 213 79*****************3...4557******99********99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 617 aa Download sequence
MEVCDASAVS PAQLYAGGNG NMAHWCGVTQ CSSRAPQMQY SSGMEEEQKP FTTQQALPIH 60 QGSCQQFDAI TATAATPPAS GRGKEDSLPL GDAMEGVQTE SEDESFSGEE EDMEETIQED 120 EEVEDEEEVD ECMDEECDMG AASRDRRERY GTFQDCEAVK SHYRGVCKDK KKGKWRVQIK 180 VANLGKSGVS VGYFDNEAEG ARAYDRAAIA LLGREKATQL NFDVEDYDLT EIPDLRGKTR 240 EEVKTALKKD RTRGPRRRTN SRTRTSRYVG VGKSNRKNQW QARLIIDKKV THLGYYPKEE 300 EAARIYDRVS LILFEENGTL NFPEEKEARR LEARQSDDKR PPLLPTSTRA EVQAHLGVTT 360 MNKSSDFRGV SRKKHKWEAK VMVNRRWVYR ELFSDERAAA HAYDKAVKKW KPDSYHNYIN 420 FPDEPGTSPA PTSKNGRQVP ISKGQHSKTG ASSRTPTPLS QKKSARLSSL EHPTPPPSHN 480 YSPSRHFHSA ARIGTKDVLS GNASRASREF FPQNLRTIQP PPYRGQTAAR EADQQRDTKV 540 PAEHSPKRNP PELLPMDSLD REGSEAHEVP EAVRRQQLLP GGSYGRPSTC KSTFSTSISY 600 GRSVQPLPSL QCGALL*

Sequence ? help Back to Top

Protein Sequence Length: 617 aa Download sequence

MEVCDASAVS PAQLYAGGNG NMAHWCGVTQ CSSRAPQMQY SSGMEEEQKP FTTQQALPIH  60
QGSCQQFDAI TATAATPPAS GRGKEDSLPL GDAMEGVQTE SEDESFSGEE EDMEETIQED  120
EEVEDEEEVD ECMDEECDMG AASRDRRERY GTFQDCEAVK SHYRGVCKDK KKGKWRVQIK  180
VANLGKSGVS VGYFDNEAEG ARAYDRAAIA LLGREKATQL NFDVEDYDLT EIPDLRGKTR  240
EEVKTALKKD RTRGPRRRTN SRTRTSRYVG VGKSNRKNQW QARLIIDKKV THLGYYPKEE  300
EAARIYDRVS LILFEENGTL NFPEEKEARR LEARQSDDKR PPLLPTSTRA EVQAHLGVTT  360
MNKSSDFRGV SRKKHKWEAK VMVNRRWVYR ELFSDERAAA HAYDKAVKKW KPDSYHNYIN  420
FPDEPGTSPA PTSKNGRQVP ISKGQHSKTG ASSRTPTPLS QKKSARLSSL EHPTPPPSHN  480
YSPSRHFHSA ARIGTKDVLS GNASRASREF FPQNLRTIQP PPYRGQTAAR EADQQRDTKV  540
PAEHSPKRNP PELLPMDSLD REGSEAHEVP EAVRRQQLLP GGSYGRPSTC KSTFSTSISY  600
GRSVQPLPSL QCGALL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	5e-14	AP2 family protein