PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0041s0055.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family GATA
Protein Properties Length: 445aa    MW: 47920.2 Da    PI: 9.2343
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0041s0055.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.37.8e-1789118130
                 GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyy 30 
                          C+ CgttkTp+WR+gp g+ktLCnaCG++ 
  Bobra.0041s0055.1.p  89 CTTCGTTKTPQWREGPLGPKTLCNACGVKL 118
                          ***************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    
MTDFRQGSST WSEIWDYRRA IPASYMLSNG EASAQVPGPG RLQPQAFHLP AAAHSHGAPQ  60
APPPLFQAAV QGPPQGPVPT EAKRPEKACT TCGTTKTPQW REGPLGPKTL CNACGVKLGR  120
QKKQLAQVAS EGKVADKQGD RKPKTANKVG KRPVGIMKQV QAPRRPTVQR VDSPNPPSSS  180
NTDRGNDFPP FMPHPTTSRP CRKAAARAKT ATATYGATGD WPDRETSSDS PLHRSLHDAL  240
SPSDSYLSDS AQEVAYSLRH CADVLDDPQA AHKLPPEIAQ QIGEDSVAAV SLLSLHHELR  300
ESPALAESVK LKYHAIRDGF VTVSSHKQSK YPLDHLADAC SGHASPRAPP PGVQDMVDAL  360
NSLSPQEHLE MLEIKSDMDK CLMKAHACDS SVTAVAEVFG DVVAEAKQAH KVLSQKIVRM  420
QDFLAKIQLK QRARQRIPSV GPGQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.14e-15GATA family protein