PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Bobra.0038s0078.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 168aa MW: 18875 Da PI: 10.599 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 27.6 | 7.3e-09 | 107 | 146 | 1 | 45 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAaka 45 s+++GV+ ++ +g+W ++++ +k+++lg + +e+Aa a Bobra.0038s0078.2.p 107 SKFPGVSVHRATGKWIVQLQTR-----YKNYYLGLYEKEEDAAHA 146 79****************8882.....4**********8888877 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 168 aa Download sequence |
MMMFSIAARV GKGRNMYLPH PELKGVHSQT GGFSWRGGLK LSRKMFYTPT YRTAEEAASV 60 LAGMRYMIGR EGGKPFPSGE LEKLNGLVSF QDALALLHSR PLTRGKSKFP GVSVHRATGK 120 WIVQLQTRYK NYYLGLYEKE EDAAHAFVCG LMYMRMLSGT SRKDWKL* |