PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bobra.0036s0014.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
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Family | ERF | ||||||||
Protein Properties | Length: 233aa MW: 26098.5 Da PI: 4.7353 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 35.7 | 2.1e-11 | 59 | 119 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpse.ng.......krkrfslgkfgtaeeAakaaiaarkkleg 55 +ykGV+ + +g++ AeIrd + g + r +lg+f ta+eAa a++aa+++++g Bobra.0036s0014.1.p 59 KYKGVHARD-NGKFGAEIRDHTGkLGledakgkLKPRPWLGTFKTAKEAALAYDAAARRIYG 119 8*****999.8*********655555667754444899*********************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MHRRCPRERG DGHARSRSRS RSRSRSRSRS RSRSSTLAAR ALVTTASPAS PNQMDLPVKY 60 KGVHARDNGK FGAEIRDHTG KLGLEDAKGK LKPRPWLGTF KTAKEAALAY DAAARRIYGA 120 RAICNFPQDD RDDEEEAEEE EAEEEEEEEE EEEEEEEEEE EEEEEEEEED PSVVAAAKTL 180 VQLASDKHGN SYQRPSNILT STVEKCCGAA PYMMHGHFFC VVIEQRTSGQ LA* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 15 | 23 | RSRSRSRSR |
2 | 15 | 25 | RSRSRSRSRSR |
3 | 17 | 25 | RSRSRSRSR |
4 | 17 | 27 | RSRSRSRSRSR |
5 | 19 | 27 | RSRSRSRSR |
6 | 19 | 29 | RSRSRSRSRSR |
7 | 21 | 29 | RSRSRSRSR |
8 | 21 | 31 | RSRSRSRSRSR |
9 | 23 | 31 | RSRSRSRSR |
10 | 23 | 33 | RSRSRSRSRSR |
11 | 25 | 33 | RSRSRSRSR |