PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bobra.0035s0057.3.p

Organism

Botryococcus braunii

Taxonomic ID

38881

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus

Family

ARR-B

Protein Properties

Length: 483aa MW: 51858.5 Da PI: 8.9194

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bobra.0035s0057.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.1	9.5e-29	198	251	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ e+H++Fv+av+qL G++kA+Pk+il+lm+v+gLt+e+v+SHLQkYRl Bobra.0035s0057.3.p 198 KPRVVWSVEMHQQFVQAVNQL-GIDKAVPKRILDLMNVEGLTRENVASHLQKYRL 251 79*****************.******************************8 PP
2	Myb_DNA-binding	36	1.6e-11	200	250	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e ++++v+av+qlG + +k+I m+ +g+t++++ s++qky+ Bobra.0035s0057.3.p 200 RVVWSVEMHQQFVQAVNQLGIDkaVPKRILDLMNvEGLTRENVASHLQKYR 250 678***********************************************7 PP
3	Response_reg	66.6	1.1e-22	57	143	24	109
EEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 24 eevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 v+++ +g++al+ll++k+ +Dl+l D+ mp+mdG++ll++i e +lp+i+++++ge + +l+ + Ga dfl Kp+ eel++ Bobra.0035s0057.3.p 57 DAVTTCPNGKKALDLLRDKTshFDLVLSDVYMPDMDGFKLLEHIGLEL-DLPVIMMSSNGETSVVLRGVTHGAVDFLIKPVRVEELRN 143 5799**********777777******************5544.6*********************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MAHLLQIPLE GKKHSWLHGW PLLWILSVKM GILIDLTTFA VTFCLYNLII TLNGFCDAVT 60 TCPNGKKALD LLRDKTSHFD LVLSDVYMPD MDGFKLLEHI GLELDLPVIM MSSNGETSVV 120 LRGVTHGAVD FLIKPVRVEE LRNVWQHVVR RSSTRVKDPM VLGIKGEGED DESVSDSRQD 180 KKRKEPRRDS EDGNATKKPR VVWSVEMHQQ FVQAVNQLGI DKAVPKRILD LMNVEGLTRE 240 NVASHLQKYR LYLKRLSGVN SGLSRNKSGK FQPDLSFQAL MAGNPGFPAV QYVAPGAPPG 300 MLGMADMSSL SPLQGMGPTA QGLPSLGPGH PLGGTPGLAS QLSNMVMPGA APDFLPYGAP 360 GHTGLPAQAQ AQSTAQAQMA GFEGRLAGVG SLTGQNSGGF PQLGINHYGM SGESGMGPGA 420 LDVDWNLGNN REVMQEGSGP LGLPVPHNSG RGMGNGSHQP KPCKHCKSKN LRNHASTANP 480 RT*

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MAHLLQIPLE GKKHSWLHGW PLLWILSVKM GILIDLTTFA VTFCLYNLII TLNGFCDAVT  60
TCPNGKKALD LLRDKTSHFD LVLSDVYMPD MDGFKLLEHI GLELDLPVIM MSSNGETSVV  120
LRGVTHGAVD FLIKPVRVEE LRNVWQHVVR RSSTRVKDPM VLGIKGEGED DESVSDSRQD  180
KKRKEPRRDS EDGNATKKPR VVWSVEMHQQ FVQAVNQLGI DKAVPKRILD LMNVEGLTRE  240
NVASHLQKYR LYLKRLSGVN SGLSRNKSGK FQPDLSFQAL MAGNPGFPAV QYVAPGAPPG  300
MLGMADMSSL SPLQGMGPTA QGLPSLGPGH PLGGTPGLAS QLSNMVMPGA APDFLPYGAP  360
GHTGLPAQAQ AQSTAQAQMA GFEGRLAGVG SLTGQNSGGF PQLGINHYGM SGESGMGPGA  420
LDVDWNLGNN REVMQEGSGP LGLPVPHNSG RGMGNGSHQP KPCKHCKSKN LRNHASTANP  480
RT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	7e-79	ARR-B family protein