PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bobra.0015s0106.1.p

Organism

Botryococcus braunii

Taxonomic ID

38881

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus

Family

MYB

Protein Properties

Length: 2351aa MW: 253027 Da PI: 5.0322

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bobra.0015s0106.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.1	3.5e-07	1050	1094	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + +W+++E ++ d + ++++ +++Ia++++ +Rt +c+ +++k+ Bobra.0015s0106.1.p 1050 KRPWSADEKRIFMDKFLAFPKD-FRKIASYLP-HRTTGDCVAFYYKV 1094 569***************99.*****.*********996 PP
2	Myb_DNA-binding	27.6	6.8e-09	1206	1247	2	44
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 ++WT+ E+ +lv++vk++G + +++ + mg +R+ ++k+++ Bobra.0015s0106.1.p 1206 LPWTPAEEARLVEGVKKYGRN-LDLVREFMGSNRSKASIKDFY 1247 69***************66.*****************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 2351 aa Download sequence
MSDRHNRQNR EWRSPYPRNE RERPFSKRDV NASSHADRDL FPAQHGQMPF ASQGSRFDLA 60 AQNRHGRDRP LPGPPHPLPT TPTASSMWRA HEAPRRSSPH RGSPQRIAHG GSTSGPLDRR 120 YSGLAHDRIT GRSQDSYVPR TASWEGPPRN HLDPSQSHMD RDVRRGHLPP PPPPPLVPPH 180 QLMRTIASST PLPPPPPLPP NSRGLARWPP GGGLMPADFE SGEFRNESSV NSFSGGLPHP 240 PSLGGPPHLP HTSSLGFTDD RTARRTLPGP PPVGPHTSLP PHLAQMDAAP MTDKASSSWT 300 PKLELRGPER VWGIGNRAVE EVTSLVDPAD VKLEPRRPVD AELLQQRLQA VQAVRSDPPL 360 RSDSSFEIKS EALGRGEGGA ITPPLSGTDG TPGDLPMPTV GSGGLEGHSD EAPRRKKQRL 420 KWGEGLNARN KAAKAPEAEV RSQGEAVVPQ DDMCSPSVPK IEAGDAHSQE APAVADTTLP 480 AKSVPAPERD SIAAAKDLLK GPSSPAEVSA LIPLASRMGS ADAAARTPPP GPVAEEMPST 540 GEAGPVPAAD GDGLAIGGPP GLGSPVEVLT DKLLGLDKEI GDREKELEEL EAAKLTAVRA 600 AEAARAERAE VEKDKIPDAE FPQLSDDELD EPALPDALPE SSEEEPLEPE VRFDDSEEDM 660 EVEEEEVTSE DEVQEEEEDE DEDEDEEEDE EVEDPAHSHL ERKRSQGVPP GGESNTSVLP 720 KLPQMAGGAQ QANREEALEA ELESVPEAIY NAVSTTNDKV EVDLDGTPAA EALPEPEAPE 780 TEEVVRDWVS EKKGRWALHL ARASAVEGGK DMTSEDIDSE GDADILQWSP HRKQSLLTLD 840 ERFELCSERI ALAAGEVVKA MNGQLLSCLP DYLQPEPGTS WWPKALCLNH TQMPEYRNTM 900 LTGWLNRASF KRIIMERKWL TQLRWRELAE EYRAKFEDWQ VYFAEMGLDQ LQAPVQDPIL 960 ALTRRGAGSN STRNAQRTST RSNLAMGGPP RQDLEQLAAK ERQCLDQLKN MCQMPDQLVE 1020 EDDRRFQGFE NNNLRVEDPV QQLKDEEDAK RPWSADEKRI FMDKFLAFPK DFRKIASYLP 1080 HRTTGDCVAF YYKVQKLDDF AAVRRKQQLK KRRQQSEINR STTYMGMGPA ARMPDATTTR 1140 ALPSRPTPQP YADGRPIAKT RGTRSKPAGR SQRYAPVLEP SPGIEAVEAH VAEPPPSEVA 1200 VEESNLPWTP AEEARLVEGV KKYGRNLDLV REFMGSNRSK ASIKDFYTRS RKRLKLDQLV 1260 RARGHPGGPV GELEELAPTP IGGAPEPARP ASPEDAGLNL HTTERLPEPS PEHEEGELGE 1320 DAAPRGKFRT LEDNAAVSQA VDLSARQGSG AVRQLLSLPA LTSGPPMFPA MAQHMLSLLF 1380 AHQAQQTAQA QAHAQQQANA QNAMFAQLLM NSQLPPHPFL NFAQSTTGID MLKLQTGFPH 1440 HLGIQHLLTP PLTPFHPQTF SGVHQGLSHM FPGQQFVPPG ATHPFFNPQQ AAALFRQAAA 1500 FRGCWACACP GSEADNLEDL QSARGSDQWE GVEGLPKGDP VDGGSESLEN APTRKQQAVW 1560 THQEKEAYQA WKKSGKDFSA LERALPNKTT QQIKNFQQNS RKQALNAAGE TSRKRQRPDP 1620 ASRGASSLQT PNSTPSATPA PTPPPEPPLA ADLPPRASSG GPSPPQSSVG TPGYNQAQML 1680 LLEGIRKRSQ GDPSELGTER PAGDPIGGLG DRLGPSEQDR DMSAWLTAMK EGGIGRPAAA 1740 VSPLVGLAGA LTASASASRR ESSFLETTNP EPSLASRLDQ LSRAMAPLDV GARPLGTFDT 1800 EASAFGEDGS GSAKDRASML DDGSPLSKKA KRVHVGPAIP LSPNPQGLAS ISSGGGKRDT 1860 AGPSTPSGPT ITTGGGLAHA SSAPSPAQCM DTLKQLRTLA ELTRVDDMPE APPIFPDPFT 1920 TPDLPPKGLK ESHVQLLRNL AMARGASQSL AAEPDATPAR ALPHSWLSSI SVSRATGGLS 1980 VPLAYGNAVP LGPQTLSALL PSSGLDPLPA PRIAPLMDSS PGGAVPLSAL QQEPPATLPS 2040 AGDTSGLWGG GQPLRDKFPA VRQPAEEPTL VEKLELLTKR PVKLPELRCT ESVPPRTSPE 2100 ADVVQRNVPQ SLPSGAQHRS AQRQPSPSPH PLPMGTPRQA ATEAGEEETP EHPERKAHAA 2160 FFPRRPSPEH PENPGTTFAH RPQSPGYPGD SPSGQGTVAG EELADTYLGG PSKKESLGSV 2220 LQRTPGSKYG TPGEASRQEA VDMDIDTEAP SEVLPDALDQ TSLQSQEIPD QGDLAGLGSP 2280 SMGPHHDENL GLPGKAPPGQ ARSTLTPLPG REEDQVEDLP HTSPPAEANM DSEDTPMEQQ 2340 KIVEEGFPHS *

Sequence ? help Back to Top

Protein Sequence Length: 2351 aa Download sequence

MSDRHNRQNR EWRSPYPRNE RERPFSKRDV NASSHADRDL FPAQHGQMPF ASQGSRFDLA  60
AQNRHGRDRP LPGPPHPLPT TPTASSMWRA HEAPRRSSPH RGSPQRIAHG GSTSGPLDRR  120
YSGLAHDRIT GRSQDSYVPR TASWEGPPRN HLDPSQSHMD RDVRRGHLPP PPPPPLVPPH  180
QLMRTIASST PLPPPPPLPP NSRGLARWPP GGGLMPADFE SGEFRNESSV NSFSGGLPHP  240
PSLGGPPHLP HTSSLGFTDD RTARRTLPGP PPVGPHTSLP PHLAQMDAAP MTDKASSSWT  300
PKLELRGPER VWGIGNRAVE EVTSLVDPAD VKLEPRRPVD AELLQQRLQA VQAVRSDPPL  360
RSDSSFEIKS EALGRGEGGA ITPPLSGTDG TPGDLPMPTV GSGGLEGHSD EAPRRKKQRL  420
KWGEGLNARN KAAKAPEAEV RSQGEAVVPQ DDMCSPSVPK IEAGDAHSQE APAVADTTLP  480
AKSVPAPERD SIAAAKDLLK GPSSPAEVSA LIPLASRMGS ADAAARTPPP GPVAEEMPST  540
GEAGPVPAAD GDGLAIGGPP GLGSPVEVLT DKLLGLDKEI GDREKELEEL EAAKLTAVRA  600
AEAARAERAE VEKDKIPDAE FPQLSDDELD EPALPDALPE SSEEEPLEPE VRFDDSEEDM  660
EVEEEEVTSE DEVQEEEEDE DEDEDEEEDE EVEDPAHSHL ERKRSQGVPP GGESNTSVLP  720
KLPQMAGGAQ QANREEALEA ELESVPEAIY NAVSTTNDKV EVDLDGTPAA EALPEPEAPE  780
TEEVVRDWVS EKKGRWALHL ARASAVEGGK DMTSEDIDSE GDADILQWSP HRKQSLLTLD  840
ERFELCSERI ALAAGEVVKA MNGQLLSCLP DYLQPEPGTS WWPKALCLNH TQMPEYRNTM  900
LTGWLNRASF KRIIMERKWL TQLRWRELAE EYRAKFEDWQ VYFAEMGLDQ LQAPVQDPIL  960
ALTRRGAGSN STRNAQRTST RSNLAMGGPP RQDLEQLAAK ERQCLDQLKN MCQMPDQLVE  1020
EDDRRFQGFE NNNLRVEDPV QQLKDEEDAK RPWSADEKRI FMDKFLAFPK DFRKIASYLP  1080
HRTTGDCVAF YYKVQKLDDF AAVRRKQQLK KRRQQSEINR STTYMGMGPA ARMPDATTTR  1140
ALPSRPTPQP YADGRPIAKT RGTRSKPAGR SQRYAPVLEP SPGIEAVEAH VAEPPPSEVA  1200
VEESNLPWTP AEEARLVEGV KKYGRNLDLV REFMGSNRSK ASIKDFYTRS RKRLKLDQLV  1260
RARGHPGGPV GELEELAPTP IGGAPEPARP ASPEDAGLNL HTTERLPEPS PEHEEGELGE  1320
DAAPRGKFRT LEDNAAVSQA VDLSARQGSG AVRQLLSLPA LTSGPPMFPA MAQHMLSLLF  1380
AHQAQQTAQA QAHAQQQANA QNAMFAQLLM NSQLPPHPFL NFAQSTTGID MLKLQTGFPH  1440
HLGIQHLLTP PLTPFHPQTF SGVHQGLSHM FPGQQFVPPG ATHPFFNPQQ AAALFRQAAA  1500
FRGCWACACP GSEADNLEDL QSARGSDQWE GVEGLPKGDP VDGGSESLEN APTRKQQAVW  1560
THQEKEAYQA WKKSGKDFSA LERALPNKTT QQIKNFQQNS RKQALNAAGE TSRKRQRPDP  1620
ASRGASSLQT PNSTPSATPA PTPPPEPPLA ADLPPRASSG GPSPPQSSVG TPGYNQAQML  1680
LLEGIRKRSQ GDPSELGTER PAGDPIGGLG DRLGPSEQDR DMSAWLTAMK EGGIGRPAAA  1740
VSPLVGLAGA LTASASASRR ESSFLETTNP EPSLASRLDQ LSRAMAPLDV GARPLGTFDT  1800
EASAFGEDGS GSAKDRASML DDGSPLSKKA KRVHVGPAIP LSPNPQGLAS ISSGGGKRDT  1860
AGPSTPSGPT ITTGGGLAHA SSAPSPAQCM DTLKQLRTLA ELTRVDDMPE APPIFPDPFT  1920
TPDLPPKGLK ESHVQLLRNL AMARGASQSL AAEPDATPAR ALPHSWLSSI SVSRATGGLS  1980
VPLAYGNAVP LGPQTLSALL PSSGLDPLPA PRIAPLMDSS PGGAVPLSAL QQEPPATLPS  2040
AGDTSGLWGG GQPLRDKFPA VRQPAEEPTL VEKLELLTKR PVKLPELRCT ESVPPRTSPE  2100
ADVVQRNVPQ SLPSGAQHRS AQRQPSPSPH PLPMGTPRQA ATEAGEEETP EHPERKAHAA  2160
FFPRRPSPEH PENPGTTFAH RPQSPGYPGD SPSGQGTVAG EELADTYLGG PSKKESLGSV  2220
LQRTPGSKYG TPGEASRQEA VDMDIDTEAP SEVLPDALDQ TSLQSQEIPD QGDLAGLGSP  2280
SMGPHHDENL GLPGKAPPGQ ARSTLTPLPG REEDQVEDLP HTSPPAEANM DSEDTPMEQQ  2340
KIVEEGFPHS *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	3e-15	MYB family protein