PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bobra.0014s0080.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
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Family | E2F/DP | ||||||||
Protein Properties | Length: 140aa MW: 15382.5 Da PI: 11.5338 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 46.6 | 5.5e-15 | 18 | 77 | 2 | 49 |
E2F_TDP 2 keksLrlltqkflklleksee.givtlnevakeLvse..............dvknkrRRiYDi 49 ++k+Lr++++k ++ek+e+ g++t+neva+eLv e kn+rRR+YD+ Bobra.0014s0080.1.p 18 TGKGLRHFSMK---VCEKVESkGRTTYNEVADELVIEfsqpdaeataggstTRKNIRRRVYDA 77 689********...*****999****************************9999********7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence |
MAATPPSVDL GGGGARQTGK GLRHFSMKVC EKVESKGRTT YNEVADELVI EFSQPDAEAT 60 AGGSTTRKNI RRRVYDAPER AEWPWTSSAR RRRTFPGRGC PCQLAARWPP SASRSRSWSR 120 RLPNSMATSR LAMLPLSVF* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 71 | 93 | RRRVYDAPERAEWPWTSSARRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03415.1 | 1e-23 | E2F/DP family protein |