PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bobra.0010s0007.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
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Family | ERF | ||||||||
Protein Properties | Length: 190aa MW: 20916.4 Da PI: 5.2354 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 35.5 | 2.6e-11 | 87 | 133 | 2 | 53 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 ++GV+ kr+ W+A I++ + ++++g+f t++eAa+a++ + ++ Bobra.0010s0007.1.p 87 LFRGVSKSGKRKPWRAMIQH------NhEQHHIGYFETPQEAARAYDLKAIQY 133 69****9999999*******......44*******************999876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
MELDDATLCL LDLACDRATT MAFDRYGSTE ELTVEDDLDR TLQGFHGAVT SFIDAGDAAE 60 ALTSLQGCQP TSTSRERPSG MGRGTSLFRG VSKSGKRKPW RAMIQHNHEQ HHIGYFETPQ 120 EAARAYDLKA IQYMGPTAPT NFPLTDYESH LKIPSGPPIL SQGPGSDTEE VCLFHIPFHI 180 RSQAFVWVQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-12 | AP2 family protein |