PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bobra.0008s0010.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
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Family | NF-YB | ||||||||
Protein Properties | Length: 138aa MW: 15080.2 Da PI: 4.7096 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 56.4 | 7e-18 | 3 | 92 | 3 | 92 |
NF-YB 3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyre 92 +q+ lP a + ++mk + Pa+ ++++da ++ c ef+ +++sea++ c++e+++ ++++ +l al tlGf + +++ l+ +++ Bobra.0008s0010.1.p 3 DQEVGLPRATILKMMKDAAPAELRLANDAVSLIGLCCNEFVQLISSEATELCEKENKHVLQPEHVLRALDTLGFSAMLPEVQRALEGWQD 92 78889***********************************************************************99999998888776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 138 aa Download sequence |
MDDQEVGLPR ATILKMMKDA APAELRLAND AVSLIGLCCN EFVQLISSEA TELCEKENKH 60 VLQPEHVLRA LDTLGFSAML PEVQRALEGW QDSNKGVQRI GKRKTKAEEA GLSEAEQIAL 120 QQKLFAEARA SSTFAEL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23090.4 | 2e-29 | NF-YB family protein |