PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0008s0001.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family bHLH
Protein Properties Length: 327aa    MW: 35520.7 Da    PI: 8.4884
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0008s0001.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.21.9e-153278555
                         HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                         h+e E++RRdriN +fe Lr+ +P       kK++Ka  L +Av+YI++Lq
  Bobra.0008s0001.1.p 32 HKETEQKRRDRINAGFEALRDTIPVG----EKKVDKAGFLHEAVNYIRDLQ 78
                         9***********************96....69******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MEACSAPGSS KGCKRARSSP SGRSCPRGGL LHKETEQKRR DRINAGFEAL RDTIPVGEKK  60
VDKAGFLHEA VNYIRDLQGL LRQCVEVGGL KDLSEDAQWS YRMLLPQMDV QQICKQSPFE  120
ARELAKLKEI EEDPLKSGSA AIIEEYQPSI SASAAPFVLP LGSSALEVNP TKLLHEMLLQ  180
HMQQQQALVS LLCAWPAEGA EVLQECYKNQ QATAGPVALL HQLQSHQLLN APIGLPILPL  240
QVSALPLQPV VPTQHVSEAL HTTRKCYQHL DTKHAQVGAE AKEGTAHPSS SRSVAGRPTK  300
FRKCNTAAIL SKPLPYASSG FTHPAK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08130.17e-09bHLH family protein