PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA67185.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | MYB_related | ||||||||
Protein Properties | Length: 203aa MW: 22659.5 Da PI: 7.3028 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 40.9 | 4.9e-13 | 138 | 182 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +W+++E+ +++++ +++G g+W+ I+r k+Rt+ q+ s+ qk+ PKA67185.1 138 PWSEDEHRRFLEGLERFGRGDWRNISRWAVKTRTPTQVASHAQKF 182 8******************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MYGGYKQFIA GSCGGGIPAP QSPLNQSEGE PLEKALPEPL MAPWTQSENK AFEKALVHVA 60 EDSPDRWRQI AAQIPGKTPE DIYVHYLALV HDIALIDSDG VDLPPYEEAV GACGSSHVAV 120 ASHSHAPPAR ECRRKGVPWS EDEHRRFLEG LERFGRGDWR NISRWAVKTR TPTQVASHAQ 180 KFFLRQTLTK EKESKRKSIH DIT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04760.1 | 2e-46 | MYB family protein |