PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA67104.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 290aa MW: 32955.7 Da PI: 5.8663

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA67104.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.3	2.6e-31	69	122	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+++AtPk +l+lm+v gL+++hvkSHLQ++R+ PKA67104.1 69 PRLRWTPDLHFCFVHAVERLGGPDRATPKLVLQLMNVRGLSIAHVKSHLQMFRS 122 8****************************************************7 PP
2	Myb_DNA-binding	48.4	2.2e-15	70	121	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+av++lGg+ t+k++ + m+ g++ ++ks++q+++ PKA67104.1 70 RLRWTPDLHFCFVHAVERLGGPdraTPKLVLQLMNvRGLSIAHVKSHLQMFR 121 89***********************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MTASSCSSEN SENFVAPSHD KDEDEDEGDE NPKAAAGGSS SNSTVEEGDR KVGMSSGSTV 60 RQYNRSKIPR LRWTPDLHFC FVHAVERLGG PDRATPKLVL QLMNVRGLSI AHVKSHLQMF 120 RSKKIDDSEQ ASQNLCAVKE SEKQPNVYSL GQLPNFLVFE QRTSGLRYAT SWIGQGCLNP 180 MGSASQRPAT IAFFREHDRP RPFFEQTRWK EEDVEPDLEL SLTLTMRKEK RKRTWEEEEE 240 VDSRLSLSMS TPHHSRTEEQ RELSQKDPKM TEMEERDLHA KVASTLDLTI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	226	233	MRKEKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	5e-44	G2-like family protein