PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA66929.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

AP2

Protein Properties

Length: 464aa MW: 51179.8 Da PI: 6.4568

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA66929.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.6	5.7e-17	154	203	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g PKA66929.1 154 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 203 78*****************......55**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MLDFNLLSSD ESSPTPEKPL PEGSGGGRMD DSGTSKSSVL NADESSLVCD ENSSTLPAFR 60 FDVLKDGAEG EEEVDMERDD NGEAPETCFV TLELFPPAHP TVTVKPSSSS RPVYLDFGFC 120 QADSPDITEF RFLHPQPQQP VVKKNRRGPR SRSSQYRGVT FYRRTGRWES HIWDCGKQVY 180 LGGFDTAHAA ARAYDRAAIK FRGVEADINF NAVDYEEDLK QMKNLTKEEV VQLLRRESNG 240 FSRGGSNYKG ATLHKCGQWE TRMGQLFGKK YKAYDKAVIK GYAMEAVANF EPSVYEGNLP 300 SPASGLGNNP SICEIDLGLR ISQPSDHGQK RIDNPRGIQF HYGSYGAFDV QKLENDHRSS 360 IPIIQNHPLV AACDRSQAWN NAFQGPFTTS EGQTMNSKAR AGPPAPPSWS WQIDHTPTAQ 420 PFSYAAASSG FSTATVTATP PPLVGSHHHP LLPMPSSHHQ FIRS

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MLDFNLLSSD ESSPTPEKPL PEGSGGGRMD DSGTSKSSVL NADESSLVCD ENSSTLPAFR  60
FDVLKDGAEG EEEVDMERDD NGEAPETCFV TLELFPPAHP TVTVKPSSSS RPVYLDFGFC  120
QADSPDITEF RFLHPQPQQP VVKKNRRGPR SRSSQYRGVT FYRRTGRWES HIWDCGKQVY  180
LGGFDTAHAA ARAYDRAAIK FRGVEADINF NAVDYEEDLK QMKNLTKEEV VQLLRRESNG  240
FSRGGSNYKG ATLHKCGQWE TRMGQLFGKK YKAYDKAVIK GYAMEAVANF EPSVYEGNLP  300
SPASGLGNNP SICEIDLGLR ISQPSDHGQK RIDNPRGIQF HYGSYGAFDV QKLENDHRSS  360
IPIIQNHPLV AACDRSQAWN NAFQGPFTTS EGQTMNSKAR AGPPAPPSWS WQIDHTPTAQ  420
PFSYAAASSG FSTATVTATP PPLVGSHHHP LLPMPSSHHQ FIRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.1	2e-80	AP2 family protein