PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA66861.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

C2H2

Protein Properties

Length: 1093aa MW: 119295 Da PI: 6.8409

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA66861.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.2	3.2e-06	945	967	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+dCg +F+++++Lk+H+ H PKA66861.1 945 HQCHDCGLRFKHQEQLKSHLDWH 967 79*****************9877 PP

Sequence ? help Back to Top
Protein Sequence Length: 1093 aa Download sequence
MEMEAPRRSA VDRSREPGLK KPRLAEEAER DRGPSGGVSA DRSRAYQQPR PGVGAGLGNP 60 RFRASEREER EDTGRGGTSY QQQQELVAQY KIALAELTFN SKPIITNLTI IAGENIHAAK 120 AIAATICANV LEVPSEQKLP SLYLLDSIVK NIGSDYIKYF AARLPEVFCK AYKQVDPSIH 180 PSMRHLFGTW KGVFPPACLQ LIEKELSFQT VVNGSSGGTV AKPNTQVQRP SHSIHVNPKY 240 LEARQHLQQS ARVCGSVLPD LYFLWDTGKG LSAEDIDDNA TPVEDAERSS RTPGPAVSRH 300 WAELSNKIPN VQRPQRERLN DLIHEKKDYK DVRDPHFSSQ LPQQPNLGIG RAIQRVKERE 360 ELEKPFIGDG GTNEMTAYRR NGFEANHAYG SYRTSGSALS DSQLPSAHLN SSDKTNWAAI 420 NNWKHSDEEE YIWNTDSSST DYETANKSTR RSSTNDDVDK PVSLQSRKRM SNESKQLDLG 480 WNKPDLFSHL KKSAAVDERT SFHRDHEEQY AQHHNTKDMD SRINYKGSWP LRDTPLPAVG 540 LNLSSSRVSS QMDGPDGQSI PVSGSLSKNE ASSLSKPGFQ SSNLASSIGI NSVVGSVGIF 600 GQQRHLPLRP PSPSVNSIQP ASLNQQKSHG RVEQDFLVKL SPTSRNSSHL AEQFNRDPVI 660 PLGRDSFTNL GGKVGLQARP SLSAETSLPH VVELKEELSS LQQLSPESFQ SVPSEASLPV 720 SPGFVADKLQ EFSGAMTSVN SVGISGKSTA SNLFPAIMKS SLLPNKPGNG LQNLNIQPPL 780 PHGPPPAQAL TSSALSITAS VESTPSGARS LLPPLPPGPP PPSSLVDSTS KLSNSASVNL 840 NPLSSLLNSL VEKGIIAPVT QLPTLTSSET PKENLNQNNN LDRNTSITPS LKKLPVMEPS 900 PSGSLSLVPP PSPVMDNVVG TKFKTEIIRE FHPLVIQSLL DDLKHQCHDC GLRFKHQEQL 960 KSHLDWHNSK SSELANADKV CRRWYSSICN WVSGDVEPPS GPVPDPSSET TPYENLEPMV 1020 IADESQSICA LCGEPFEDFF SVEKDEWMYK GTVYLDLTDG KGVIGGTGER STAKLIVHAK 1080 CIAASANEGD VAQ

Sequence ? help Back to Top

Protein Sequence Length: 1093 aa Download sequence

MEMEAPRRSA VDRSREPGLK KPRLAEEAER DRGPSGGVSA DRSRAYQQPR PGVGAGLGNP  60
RFRASEREER EDTGRGGTSY QQQQELVAQY KIALAELTFN SKPIITNLTI IAGENIHAAK  120
AIAATICANV LEVPSEQKLP SLYLLDSIVK NIGSDYIKYF AARLPEVFCK AYKQVDPSIH  180
PSMRHLFGTW KGVFPPACLQ LIEKELSFQT VVNGSSGGTV AKPNTQVQRP SHSIHVNPKY  240
LEARQHLQQS ARVCGSVLPD LYFLWDTGKG LSAEDIDDNA TPVEDAERSS RTPGPAVSRH  300
WAELSNKIPN VQRPQRERLN DLIHEKKDYK DVRDPHFSSQ LPQQPNLGIG RAIQRVKERE  360
ELEKPFIGDG GTNEMTAYRR NGFEANHAYG SYRTSGSALS DSQLPSAHLN SSDKTNWAAI  420
NNWKHSDEEE YIWNTDSSST DYETANKSTR RSSTNDDVDK PVSLQSRKRM SNESKQLDLG  480
WNKPDLFSHL KKSAAVDERT SFHRDHEEQY AQHHNTKDMD SRINYKGSWP LRDTPLPAVG  540
LNLSSSRVSS QMDGPDGQSI PVSGSLSKNE ASSLSKPGFQ SSNLASSIGI NSVVGSVGIF  600
GQQRHLPLRP PSPSVNSIQP ASLNQQKSHG RVEQDFLVKL SPTSRNSSHL AEQFNRDPVI  660
PLGRDSFTNL GGKVGLQARP SLSAETSLPH VVELKEELSS LQQLSPESFQ SVPSEASLPV  720
SPGFVADKLQ EFSGAMTSVN SVGISGKSTA SNLFPAIMKS SLLPNKPGNG LQNLNIQPPL  780
PHGPPPAQAL TSSALSITAS VESTPSGARS LLPPLPPGPP PPSSLVDSTS KLSNSASVNL  840
NPLSSLLNSL VEKGIIAPVT QLPTLTSSET PKENLNQNNN LDRNTSITPS LKKLPVMEPS  900
PSGSLSLVPP PSPVMDNVVG TKFKTEIIRE FHPLVIQSLL DDLKHQCHDC GLRFKHQEQL  960
KSHLDWHNSK SSELANADKV CRRWYSSICN WVSGDVEPPS GPVPDPSSET TPYENLEPMV  1020
IADESQSICA LCGEPFEDFF SVEKDEWMYK GTVYLDLTDG KGVIGGTGER STAKLIVHAK  1080
CIAASANEGD VAQ