PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA66695.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

FAR1

Protein Properties

Length: 686aa MW: 79435.7 Da PI: 9.4828

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA66695.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.3	6.2e-24	28	117	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y++YA +GFsvrks++++ +++ ++r+fvCsk g++++ekk+ t++++ +r r+gC a+++ k + +gkw ++kl++eHnHela PKA66695.1 28 IYSKYALLTGFSVRKSHNSYWAGTRKPKSREFVCSKAGFKNNEKKNdTDTSKFSRLDGRCGCPAMVRFKVDINGKWWINKLVEEHNHELA 117 7*************************************999999566677799*******************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
MEADSCDILK LSELLRTSVH NEDQAYNIYS KYALLTGFSV RKSHNSYWAG TRKPKSREFV 60 CSKAGFKNNE KKNDTDTSKF SRLDGRCGCP AMVRFKVDIN GKWWINKLVE EHNHELASPK 120 ERHLLRSHRS IHGKEAGVLQ CMSKVGISTA DAFSYIVQQA GDAYNFVNHE KLLRIESGDA 180 FNLLKIFRER KDFDSLFDWD VKFDEEQRLT NFLWVDGKCK MDYNIFGDVV VFDTSYRMNK 240 YNLICAPLIG VNNHRQNILF GAAFLVDETI ISFEWLFQSF LNMMNGKQSI TIFTDQDQAM 300 SKAIQNVFPK TRHRLCQWHI SKKVPSMVHV ANTNEEVRDL FYICMRSCDT PQEFEVKWEM 360 MLEKGGLHEN EWLSNLYKIK HKWSTSMNRD VLDLGILSTQ RSESTNNVCH GISKPTSTLT 420 DCFLGLERAI ARWRQAEVDE DFMCRQKSST PIIQHSPLLN QAREVYTIKI YNIFQKLLMN 480 GACGSRSNLI STTANTKVYS VGRFGDQKEY QVSFDSTSLD IKCTCKKFET VGLLCSHALR 540 ILLMMNVMVL PDRYIVKRWT KHINKKMDYT YMAPPIIKQS ENQQFLNDAN RFCYQLMMKA 600 QYSEYTRKLF VQHMDQLDAI INHGLQSSSI LPILKSGVPK QVVNIVVRDP PMKRPKGVTN 660 ARLKGRWEKG KKKKGMTLLI IISFIV

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

MEADSCDILK LSELLRTSVH NEDQAYNIYS KYALLTGFSV RKSHNSYWAG TRKPKSREFV  60
CSKAGFKNNE KKNDTDTSKF SRLDGRCGCP AMVRFKVDIN GKWWINKLVE EHNHELASPK  120
ERHLLRSHRS IHGKEAGVLQ CMSKVGISTA DAFSYIVQQA GDAYNFVNHE KLLRIESGDA  180
FNLLKIFRER KDFDSLFDWD VKFDEEQRLT NFLWVDGKCK MDYNIFGDVV VFDTSYRMNK  240
YNLICAPLIG VNNHRQNILF GAAFLVDETI ISFEWLFQSF LNMMNGKQSI TIFTDQDQAM  300
SKAIQNVFPK TRHRLCQWHI SKKVPSMVHV ANTNEEVRDL FYICMRSCDT PQEFEVKWEM  360
MLEKGGLHEN EWLSNLYKIK HKWSTSMNRD VLDLGILSTQ RSESTNNVCH GISKPTSTLT  420
DCFLGLERAI ARWRQAEVDE DFMCRQKSST PIIQHSPLLN QAREVYTIKI YNIFQKLLMN  480
GACGSRSNLI STTANTKVYS VGRFGDQKEY QVSFDSTSLD IKCTCKKFET VGLLCSHALR  540
ILLMMNVMVL PDRYIVKRWT KHINKKMDYT YMAPPIIKQS ENQQFLNDAN RFCYQLMMKA  600
QYSEYTRKLF VQHMDQLDAI INHGLQSSSI LPILKSGVPK QVVNIVVRDP PMKRPKGVTN  660
ARLKGRWEKG KKKKGMTLLI IISFIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-101	FAR1 family protein