PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA66440.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 216aa MW: 23927.9 Da PI: 6.7994 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.4 | 8.7e-19 | 82 | 131 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrd + + r++lg+f+t+e Aa a+++a+ +++g PKA66440.1 82 YRGVRRRP-WGKFAAEIRDSTR---HgVRVWLGTFDTPEAAALAYDQAAFSMRG 131 9*******.**********422...25*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MANFSPIFHS PISEPSSDSS IGSSPDSSLL PFNVDDSDEM ILFDMMLAAA ASDAGSRPSI 60 SRTKEEEVDS SSPMMREKRR SYRGVRRRPW GKFAAEIRDS TRHGVRVWLG TFDTPEAAAL 120 AYDQAAFSMR GSTAVLNFPV ERVRDSLNGV RYVEQGCSPV MALKRRHSLR RKTAAAAATA 180 RKEKGERRIE SLVEFEDLGA EYLEELLRVS EVGSSC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 1e-56 | ERF family protein |