PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA66293.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 408aa    MW: 44940.6 Da    PI: 6.2738
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA66293.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS258.13.1e-79574072374
        GRAS   2 velLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 v++L+++Ae +++gd+  a+++Larl+++  +p+g+p+ R a++f+eAL++  +                  ++  +l+a+k+f e+sP+l+f+++t+ 
  PKA66293.1  57 VDQLFKAAEQIEAGDTISAHRILARLNQQlPAPSGKPLIRSAFFFKEALSSIATP----------------IDVLLKLSAYKAFAEISPVLQFTNFTTT 139
                 579************************998*******************997776................2377889********************* PP

        GRAS 100 qaIleav.egeervHiiDfdisqGlQWpaLlqaLasRpeg....ppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlelee 193
                 q Ile++ +g++ +HiiDfd++ G +W aL+q+L++R++     +p+lRiT++ s  s++  el+ ++e+L++fA++l++p+e ++l  ++++ + + +
  PKA66293.1 140 QSILEELtAGANSIHIIDFDLGVGSHWSALIQELSQRRSAamtvAPKLRITAFTSLGSHHPLELHLIQENLTHFAANLNLPLELHFLPLESFDPVAILS 238
                 ****9862567************************9994445559************9*****************************888888888888 PP

        GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
                  + ++ E++aV l ++l++ +    +l++   +vL+l+k+lsPk+++ ve+ +++n+ +F ++f++a++ ++ l++s+ea+ + + e + k+Er ll++
  PKA66293.1 239 TSSNSAENIAVILPVSLFSYH----PLAK---TVLSLIKQLSPKIMISVEHGCSRNDLPFSQHFFHAFQSHTLLLESIEAS-GINPEIAEKIERYLLQP 329
                 88888************9997....7777...9*********************************************999.88999************ PP

        GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +i++ v  + ++      +l  Wr+ l +aGF pv++s++a++ a++l+++  ++g+rv +++ sl+l W++  + svSaWr
  PKA66293.1 330 RIESSVLGRYQA----GVKLLPWRMLLASAGFVPVKFSNFAETMAECLIKRALVRGFRVSKNQSSLLLSWQQGDIASVSAWR 407
                 *******99998....8899*************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    
MAVVSGDEWA AELQPVPASL RSVEDWESML PEPAADSGRD PSFLHWFGAD ADEAVKVDQL  60
FKAAEQIEAG DTISAHRILA RLNQQLPAPS GKPLIRSAFF FKEALSSIAT PIDVLLKLSA  120
YKAFAEISPV LQFTNFTTTQ SILEELTAGA NSIHIIDFDL GVGSHWSALI QELSQRRSAA  180
MTVAPKLRIT AFTSLGSHHP LELHLIQENL THFAANLNLP LELHFLPLES FDPVAILSTS  240
SNSAENIAVI LPVSLFSYHP LAKTVLSLIK QLSPKIMISV EHGCSRNDLP FSQHFFHAFQ  300
SHTLLLESIE ASGINPEIAE KIERYLLQPR IESSVLGRYQ AGVKLLPWRM LLASAGFVPV  360
KFSNFAETMA ECLIKRALVR GFRVSKNQSS LLLSWQQGDI ASVSAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.16e-89GRAS family protein