PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA66289.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB_related
Protein Properties Length: 326aa    MW: 35948.4 Da    PI: 8.4496
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA66289.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding391.9e-124791147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT++E++++++a +++  + Wk+I + +   +t  q++s+ qky
       PKA66289.1 47 RESWTEQEHDRFLEALQLFDRD-WKKIEAFVA-SKTVIQIRSHAQKY 91
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MALPGVAGIG VAAGSVSSRA DAYPAAASYC EDPNKKIRKP YTISKSRESW TEQEHDRFLE  60
ALQLFDRDWK KIEAFVASKT VIQIRSHAQK YFLKVQKNGT GEHVPPPRPK RKAAHPYPQK  120
ASKNASLSSQ AADSVEEPLH SLEQGNTVMR NASSAVRNSN TNTVPSWAYS CIQPVTASQP  180
TKDDAPLAAM VSSCSSGSMG SSNGTQQASE IVEQEDHIPS FHVLPDFARV YSFLGSMFDP  240
STSDHLQKLQ EMDPIDAETV LLLMRNLAVN LTSSEFESHR TLLSSYEAGR GEVKSFGVHA  300
PFIYNEKLSL VHQKKKLSLE KVVQWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.23e-79MYB_related family protein